Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq9 136 2e-27 seq8 131 1e-25 seq5 127 1e-24 seq10 122 5e-23 seq6 114 8e-21 seq3 104 1e-17 seq4 95.1 8e-15 seq1 87.8 1e-12 seq3787 84.2 1e-11 >seq9 Length=37155481 Score = 136 bits (150), Expect = 2e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| ||||| |||||||| |||||| || || || ||||| | || |||| Sbjct 16984481 AGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATATTGTAATCAGCGAGGGTTCTG 16984540 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || ||||| ||||| || |||||||| ||||| || || | |||||| Sbjct 16984541 CCGTCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGAATACCCTCC 16984600 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | ||||||| | || ||||| ||||||||| || | || Sbjct 16984601 TTGTCTTGGATC-TTAGCTTTAACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGCGT 16984659 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || ||||| | || || ||||| |||||||| Sbjct 16984660 GATCGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCAT 16984698 Score = 123 bits (136), Expect = 2e-23 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || || |||||| |||||||| || || | ||| || || Sbjct 16984025 AGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGA 16984084 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || || || || | |||||| ||||| || || | || ||| Sbjct 16984085 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATCCCTTCC 16984144 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| ||| | || ||| || ||| ||||| ||||||||| || | || Sbjct 16984145 TTGTCTTGGAT-TTTGGCCTTGACGTTATCAATGGTGTCCGAGCTCTCCACCTCAAGTGT 16984203 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || ||||| | || |||||||| ||||||||| Sbjct 16984204 GATGGTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCATG 16984243 Score = 122 bits (134), Expect = 5e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| ||||| |||||||| |||||| ||||||||||| || | | || || Sbjct 16960482 AGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGCCAAGGTACGA 16960541 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || |||||||| || |||||||| |||||||| || | || || Sbjct 16960542 CCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCCGGAGGAATGCCTTCT 16960601 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| ||| | ||| ||| | ||| ||||| |||||||| || | || Sbjct 16960602 TTGTCTTGGAT-TTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGAGT 16960660 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | || || ||||| |||||||| Sbjct 16960661 AATGGTCTTCCCGGTCAGTGTCTTGACAAAGATCTGCAT 16960699 Score = 113 bits (124), Expect = 3e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| ||||| |||||||| |||||| ||||||||||| || | | || || Sbjct 16960710 AGACGCAAGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGCCAAGGTACGA 16960769 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || |||||||| || || | ||| || ||||| || | |||||| Sbjct 16960770 CCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCCGGAGGAATACCCTCC 16960829 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || ||| | ||| || ||| |||||||| |||| || Sbjct 16960830 TTGTCCTGGATC-TTAGCCTTGACGTTGTCAATAGTATCTGAACTCTCCACCTCCAAAGT 16960888 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || |||||||| || || || || || ||||| Sbjct 16960889 AATAGTCTTTCCGGTTAATGTCTTAACGAAGATTTGCAT 16960927 Score = 109 bits (120), Expect = 3e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| ||||||||||| ||||| |||||| |||||||| || || | | || || Sbjct 16984253 AGACGTAACACCAAATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGA 16984312 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || |||||||| || || | ||| ||||| || || | || ||| Sbjct 16984313 CCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGAATGCCTTCC 16984372 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | |||||| | ||| ||||| |||||||| || | || Sbjct 16984373 TTGTCCTGGATC-TTAGCCTTAACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGAGT 16984431 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || |||||||| | || || ||||| |||||||| Sbjct 16984432 AATGGTCTTACCGGTAAGAGTCTTGACAAAGATCTGCAT 16984470 Score = 98.7 bits (108), Expect = 6e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | |||| || ||||| |||||| || ||||| ||||| | Sbjct 24150852 CCTCCCCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCG 24150911 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| | ||||||| || || || ||||| || || | |||||| ||||||||||| Sbjct 24150912 AGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 24150971 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| || | || || | || ||||| || || Sbjct 24150972 ATACCTTCCTTGTC-CTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGATGATTCGAC 24151030 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || | ||||||||| || || |||| ||||||||||| |||||||| || Sbjct 24151031 CTCTAAGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 24151081 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||||||||||||||| || || | || || ||| | |||||||| || ||||||||||| Sbjct 16960964 CTCCTTTTGAATGTTGTAGTCAGCGAGGGTACGCCCATCTTCAAGCTGCTTACCGGCAAA 16961023 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || || | || || ||| | || | || || || || ||| || | ||||||| Sbjct 16961024 GATCAATCTTTGCTGATCCTGAGGAATACCTTCTTTATC-CTGAATCTTGGCTTTAACGT 16961082 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | || || || ||||||||| |||| || ||||| || || || | || || | Sbjct 16961083 TGTCGATGGTATCAGAGCTCTCCACCTCCAAAGTGATCGTCTTCCCTGTCAGTGTCTTAA 16961142 Query 34694 CAAAAATCTGCAT 34706 | || |||||||| Sbjct 16961143 CGAAGATCTGCAT 16961155 >seq8 Length=21613650 Score = 131 bits (144), Expect = 1e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| |||||||| |||||| || ||||| || || | || |||| Sbjct 12585237 AGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTTCTA 12585178 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||||||||| || || ||||| || || || | ||| |||||||| || | || ||| Sbjct 12585177 CCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATCCCTTCC 12585118 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | ||| ||| | |||||||| ||||| || || | ||| Sbjct 12585117 TTGTCTTGGATC-TTGGCTTTCACGTTGTCGATTGTGTCGGAACTCTCGACCTCAAGGGT 12585059 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || ||||| || || || || || |||||||| Sbjct 12585058 GATCGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 12585020 Score = 127 bits (140), Expect = 1e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || || ||||||||||||||| || || | ||| || || Sbjct 12585465 AGACGCAACACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTGCGA 12585406 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || || || || | |||||| ||||| || || | | ||| Sbjct 12585405 CCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGTCTTCC 12585346 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | || ||| || ||| ||||| ||||||||| |||| || Sbjct 12585345 TTGTCTTGGATC-TTGGCCTTGACGTTATCAATGGTGTCCGAGCTCTCCACCTCCAGTGT 12585287 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || |||||||| | || ||||| |||||||| Sbjct 12585286 GATGGTCTTTCCGGTTAAGTTCTTGACAAAGATCTGCAT 12585248 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||||||||||||||| |||||| | ||||||| || ||||| || || | Sbjct 12585018 CCTCCACGAAGACGCAACACCAAGTGGAGATTAGTCTCCTTCTGGATGTTGTAGTCAGCG 12584959 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| |||||||||| || || ||||| || || || | ||| || ||||| || Sbjct 12584958 AGAGTTCTACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGGGGA 12584899 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||| || |||| || | ||| ||| | || ||||| ||| ||||| Sbjct 12584898 ATGCCTTCCTTATCCTGGATC-TTGGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCCAC 12584840 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| ||||| || ||||| | || || || || |||||||| Sbjct 12584839 CTCGAGGGTGATCGTCTTCCCGGTGAGAGTCTTAACGAAGATCTGCAT 12584792 >seq5 Length=23960834 Score = 127 bits (140), Expect = 1e-24 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| ||||| | ||| ||||| |||||| |||||||| || || | | ||| || Sbjct 16975293 AGACGTAACACGAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGCCAATGTACGA 16975234 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || | || || |||||||| || |||||||| ||||| ||||| | ||||||| Sbjct 16975233 CCATCCTCCAACTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCGGGCGGGATTCCCTCC 16975174 Query 34609 TTGT-CTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGG 34666 |||| |||| ||| || | || ||| || || ||||| ||||||||| || | | Sbjct 16975173 TTGTCCTGT-ATC-TTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCACCTCGAGTG 16975116 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | ||||| || || ||||| || || ||||| ||||||||| Sbjct 16975115 TGATCGTCTTTCCCGTTAAGGTCTTGACAAAGATCTGCATG 16975075 Score = 111 bits (122), Expect = 1e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || || |||||| || ||||| || || | || || || Sbjct 16975521 AGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGA 16975462 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || || || || | |||||| ||||| || || | || ||| Sbjct 16975461 CCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCC 16975402 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | || ||| || ||| ||||| |||||| || |||| || Sbjct 16975401 TTGTCTTGGATC-TTGGCCTTGACGTTATCAATCGTGTCCGAGCTCTCGACCTCCAGTGT 16975343 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || ||||| || || || || ||||| || |||||| Sbjct 16975342 GATGGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCATG 16975303 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| ||||| |||||| || ||||| ||||| | || |||| | |||| || || || Sbjct 16975051 ATGTAGAGTCGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCTCCCGTCCTCGAGCTG 16974992 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || ||||| || || | | ||| || ||||| || | |||||||||||| ||| | Sbjct 16974991 CTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTGTCT-TGAATCT 16974933 Query 34623 TTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | | |||||| | || ||||| ||| ||||| || | ||| ||||| || || | Sbjct 16974932 TGGCTTTAACATTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATCGTCTTTCCCG 16974873 Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || | ||| || ||||| Sbjct 16974872 TTAAGGTCTTGAAAAAGATATGCAT 16974848 >seq10 Length=17599535 Score = 122 bits (134), Expect = 5e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||||||| | || || || |||||| ||||| |||||||| | ||| || || Sbjct 17168582 AGACGCAACACAAGGTGAAGGGTAGACTCCTTCTGAATATTATAATCCGCAAGCGTACGA 17168523 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| ||||| || || || || | | ||| ||||| || || | || ||| Sbjct 17168522 CCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATGCCTTCC 17168463 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||||| | ||| ||| | ||| ||||| |||||| || |||| ||| Sbjct 17168462 TTGTCCTGAATCTTT-GCTTTGACGTTGTCAATCGTGTCAGAGCTCTCAACCTCCAAGGT 17168404 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||||||||| || || || ||||| |||||||| Sbjct 17168403 AATTGTTTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 17168365 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||||||||| | || ||||| |||||| || ||||| ||||| | Sbjct 17168819 CCACCACGAAGACGCAACACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCC 17168760 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || | | || ||||| |||||||| || || || | | |||||||||||| || Sbjct 17168759 AAAGTCCTACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGA 17168700 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| || | || ||| | || |||||| |||||| || Sbjct 17168699 ATCCCTTCCTTGTC-CTGAATCTTAGCCTTCACGTTGTCTATCGTGTCTGAGCTCTCAAC 17168641 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| |||||| || || || || || || |||||||| || ||||| Sbjct 17168640 TTCCAAGGTTATAGTCTTGCCTGTCAAAGTCTTCACAAATATTTGCAT 17168593 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||||||||| ||||||||||| ||||| | || || || |||||| |||| ||||| Sbjct 7692276 CTCCTTTTGGATGTTATAATCAGAAAGCCTGTAATCATCCTCCAGTTGTCTACCAGCAAA 7692217 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 ||| | | ||| ||||| || | | || ||||||||| ||| || ||||| Sbjct 7692216 TATCAGTCTCTGGTGGTCTGGTGCGATCCCTTCCTTGTCTTGAATCATTGTCTTTAAATT 7692157 Query 34635 TAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 |||| |||||| || | | ||||| | || | |||||| | | |||||||| Sbjct 7692156 GTAAATGGTGTCTGAGCGCCCAACTTCTAAGGCGGTGACTTTACCAGAGAGTGTTTTCAC 7692097 Query 34695 AAAAATCTGCAT 34706 ||| || ||||| Sbjct 7692096 AAATATTTGCAT 7692085 >seq6 Length=26286742 Score = 114 bits (126), Expect = 8e-21 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| ||||| |||||||| ||| || |||||||| || || | || || | Sbjct 15797401 AGACGCAAGACCAAGTGGAGAGTCGACTCTTTCTGAATGTTGTAGTCAGCTAGAGTCCTT 15797342 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || | || || ||||||||||| || | ||| |||||||| || | ||||||| Sbjct 15797341 CCATCCTCCAACTGCTTGCCGGCAAATATCAACCTCTGCTGGTCCGGTGGGATTCCCTCC 15797282 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || ||| || | || || || ||| ||||| ||||||||| |||| || Sbjct 15797281 TTATC-CTGAATCTTGGCCTTGACATTATCAATAGTGTCAGAGCTCTCCACCTCCAAAGT 15797223 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| || || || || || || |||||||| |||||| Sbjct 15797222 AATCGTCTTCCCCGTCAAAGTCTTGACAAAAATTTGCATG 15797183 Score = 102 bits (112), Expect = 5e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || ||| |||||| || ||||| || || | | || || Sbjct 15797857 AGACGGAGGACCAAGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGA 15797798 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || || || || | |||||| |||||||| || | || ||| Sbjct 15797797 CCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCC 15797738 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||||| | || ||| | ||| ||||| ||||||||| || | || Sbjct 15797737 TTGTCTTGGATCTTG-GCCTTCACGTTGTCAATAGTGTCGGAGCTCTCCACCTCAAGCGT 15797679 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| || ||||| || || || || |||||||||||| Sbjct 15797678 GATCGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCATG 15797639 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| ||||| |||||| || ||||| || || | | || || | || ||||| || Sbjct 15796931 ATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGACCATCCTCAAGCTG 15796872 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 ||| || || || || | |||||| ||||| || || | || ||||||||| |||||| Sbjct 15796871 TTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTT 15796812 Query 34623 TTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | || ||| | ||| ||||| ||||||||| || | || ||||| || |||| Sbjct 15796811 G-GCCTTCACGTTGTCAATAGTGTCGGAGCTCTCCACCTCAAGCGTGATCGTCTTGCCGG 15796753 Query 34682 TTAACGTTTTCACAAAAATCTGCATG 34707 | || || || || |||||||||||| Sbjct 15796752 TCAATGTCTTAACGAAAATCTGCATG 15796727 Score = 82.4 bits (90), Expect = 5e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| |||| || || || |||||| || || || ||||| | | || | Sbjct 15796489 AGACGCAAGACCAGGTGAAGCGTAGACTCCTTCTGGATATTGTAATCAGCCAAGGTCCTG 15796430 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| | || || ||||| || || | | ||| || || || || | || ||| Sbjct 15796429 CCGTCTTCCAACTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCAGGAGGAATGCCTTCC 15796370 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||||| | ||||||| | || ||||| ||| ||||| || | ||| Sbjct 15796369 TTGTCCTGAATCTTG-GCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGT 15796311 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | ||||||||||| |||||||| Sbjct 15796310 GATGGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCAT 15796272 >seq3 Length=31725688 Score = 104 bits (114), Expect = 1e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || |||||| |||||| || ||||| || |||| | || || Sbjct 13311645 AGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCTGCCAAGGTGCGA 13311586 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || || || || | |||||| |||||||| || | || ||| Sbjct 13311585 CCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCC 13311526 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||||| | || ||| | ||| ||||| ||||||||| || | || Sbjct 13311525 TTGTCTTGGATCTTG-GCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCAAGTGT 13311467 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| || || || || ||||||||||| Sbjct 13311466 GATGGTCTTGCCGGTCAAGGTCTTAACGAAAATCTGCAT 13311428 >seq4 Length=18984343 Score = 95.1 bits (104), Expect = 8e-15 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| || ||||| || || | || || | | |||| || || || || ||||| || Sbjct 357501 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTCCCGTCCTCGAGCTGCTTCCCGGCGAA 357560 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | ||||| ||||||||||| | || ||||||||| |||| || | || ||| Sbjct 357561 GATCAGCCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATC-TTGGCCTTGACGT 357619 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | || ||||| | ||| || || | ||| || |||||||| |||| ||||||| Sbjct 357620 TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTACCCGTTAGGGTTTTCA 357679 Query 34694 CAAAAATCTGCATGTT 34709 | || |||||||| || Sbjct 357680 CGAAGATCTGCATCTT 357695 >seq1 Length=28635137 Score = 87.8 bits (96), Expect = 1e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| ||||| || || || |||||| |||||||| ||||| | | || | Sbjct 22221429 AGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCAGCCAAGGTCCTG 22221488 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | ||| || || || || || | | ||| ||||| || || | |||||| Sbjct 22221489 CCATCTTCCAATTGCTTCCCAGCGAAGATAAGCCTCTGCTGGTCGGGAGGAATACCCTCC 22221548 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| ||| | ||| ||| | ||| ||||| |||||||| || | || Sbjct 22221549 TTGTCCTGGAT-TTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGT 22221607 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| || || || || || || || || || |||||| Sbjct 22221608 GATCGTCTTTCCTGTCAAAGTCTTGACGAAGATTTGCATG 22221647 >seq3787 Length=174 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||| | |||| || ||||| |||||| || ||||| ||||| | Sbjct 27 CCTCCCCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCG 86 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| | ||||||| || || || ||||| || || | |||||| ||||||||||| Sbjct 87 AGTGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 146 Query 34600 ACTCCCTCCTTGTC 34613 | || |||||||| Sbjct 147 ATACCTTCCTTGTC 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314575214214017