Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq9 147 2e-30 seq8 131 1e-25 seq1 123 2e-23 seq5 120 3e-22 seq7 116 3e-21 seq6 116 3e-21 seq3 109 5e-19 seq10 107 2e-18 seq4 98.7 9e-16 seq3787 87.8 2e-12 >seq9 Length=37155481 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || ||||| ||||| ||| | || || ||||| ||||| || Sbjct 16984243 CATGCAGATCTTTGTGAAGACTCTTACCGGAAAGACCATCACACTTGAGGTGGAGAGCTC 16984184 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| ||||| |||||||| ||||| || || || || || Sbjct 16984183 GGACACCATTGATAACGTCAAGGCCAAAATCCAAGACAAGGAAGGGATCCCTCCAGACCA 16984124 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| ||||| || | || || || ||| || |||| ||||| Sbjct 16984123 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCCGACTACAA 16984064 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 |||||| |||||||| ||| | || ||||| |||||| | || |||||| Sbjct 16984063 CATTCAGAAGGAGTCTACCCTTCACTTGGTGTTGCGTCTCCGTGGTGGC 16984015 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||||||| ||| | |||||||| || ||||| ||| Sbjct 16960699 ATGCAGATCTTTGTCAAGACACTGACCGGGAAGACCATTACTCTAGAGGTGGAGAGTTCC 16960640 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| ||||| ||||||||||||||||| || || || || Sbjct 16960639 GACACCATTGACAACGTGAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCGGACCAG 16960580 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | |||||||| || | || || || ||| | | || || ||| Sbjct 16960579 CAGCGTTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTATAAC 16960520 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || | || ||||| |||||| | || || || || Sbjct 16960519 ATTCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGTCTACGTGGAGGTAT 16960470 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||||||| ||| | |||||||| || ||||| ||| Sbjct 16960471 ATGCAGATCTTTGTCAAGACACTGACCGGGAAGACCATTACTCTAGAGGTGGAGAGTTCC 16960412 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| ||||| ||||||||||||||||| || || || || Sbjct 16960411 GACACCATTGACAACGTGAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCGGACCAG 16960352 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | |||||||| || | || || || ||| | | || |||||| Sbjct 16960351 CAGCGTTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACCCTAGCTGACTACAAC 16960292 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || ||||||||| | || ||||| | ||| | || ||||| Sbjct 16960291 ATCCAGAAAGAGTCGACCCTTCACTTGGTGCTACGTCTCCGTGGTGG 16960245 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| ||||| ||| | |||||||| || ||||| ||| Sbjct 16984470 ATGCAGATCTTTGTCAAGACTCTTACCGGTAAGACCATTACTCTAGAGGTGGAGAGTTCC 16984411 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || || ||||| |||||||| || || || || Sbjct 16984410 GACACCATTGACAACGTTAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAG 16984351 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||||| || | || || || ||| | | || |||||| Sbjct 16984350 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAAC 16984291 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | |||||||| || ||| |||| |||||||| Sbjct 16984290 ATTCAGAAGGAGTCGACTCTTCATTTGGTGTTACGTCTGCGTGGTGGCAT 16984241 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || ||| | || || | || || ||| | ||| Sbjct 24151078 ATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCTTAGAGGTCGAATCATCC 24151019 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || ||||| ||||| ||||| || || || || || Sbjct 24151018 GACACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGTATCCCGCCGGACCAG 24150959 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||| || || |||||||| | ||| | | ||||||||| Sbjct 24150958 CAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGAAGGACACTCGCGGATTACAAC 24150899 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || ||||| | ||| || |||| || Sbjct 24150898 ATCCAGAAGGAGTCGACTCTTCACCTGGTTCTCCGTCTGAGGGGAGG 24150852 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || || | || || || || || || | ||| Sbjct 30362245 ATGCAGATCTTTGTGAAAACCCTTACGGGAAAAACAATCACCCTCGAGGTCGAGTCCTCC 30362304 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| |||||||| || ||||| || Sbjct 30362305 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAG 30362364 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || |||||||| | || | |||| |||||| Sbjct 30362365 CAGCGACTGATTTTCGCCGGGAAGCAGCTGGAAGACGGACGCACGCTCGCCGACTACAAC 30362424 Query 27168 ATTCAAAAGGAGTCGAC 27184 | || ||||||||||| Sbjct 30362425 ACCCAGAAGGAGTCGAC 30362441 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| |||||||| ||| | || || || || || || | ||| Sbjct 26352421 ATGCAGATCTTCGTGAAAACCCTGACCGGGAAGACCATCACCCTCGAGGTCGAGTCCTCC 26352480 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||||||||| || || || ||||| Sbjct 26352481 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGATCAG 26352540 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 ||||| || || | ||| || ||||| | ||||| Sbjct 26352541 CAGCGATTGATCTTCGCTGGAAAACAGCTCGAAGA 26352575 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || ||| | || || ||||| |||||| ||| Sbjct 16984926 ATGCAGATCTTCGTTAAGACTCTCACAGGAAAGACCATCACCCTTGAGGTGGAAAGCTCC 16984867 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| || || || ||||| ||||| Sbjct 16984866 GACACCATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGAATCCCACCGGATCAG 16984807 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | |||||| || ||| | || || | || | | || |||||| Sbjct 16984806 CAAAGGCTTATCTTCGCCGGGAAGCAACTCGAGGATGGACGTACTCTCGCTGACTACAAC 16984747 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 || || |||||||||||| | ||| Sbjct 16984746 ATCCAGAAGGAGTCGACCCTTCAT 16984723 >seq8 Length=21613650 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAA-AACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||||| ||||| || |||| | ||||| ||| | || || || || ||||| || Sbjct 12585248 ATGCAGATCTTTGTCAAGAACT-TAACCGGAAAGACCATCACACTGGAGGTGGAGAGCTC 12585306 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| || || |||||||| |||| ||| || || || || Sbjct 12585307 GGACACCATTGATAACGTCAAGGCCAAGATCCAAGACAAGGAAGACATCCCTCCAGACCA 12585366 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| || || || | || || || ||| || |||| ||||| Sbjct 12585367 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCCTTGCCGACTACAA 12585426 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||||||||||||||||| | || ||||| |||||| | || |||||| Sbjct 12585427 CATTCAAAAGGAGTCGACCCTTCACTTGGTGTTGCGTCTCCGCGGTGGC 12585475 >seq1 Length=28635137 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || ||| |||| || ||| | || || || || ||||| || Sbjct 22221647 CATGCAAATCTTCGTCAAGACTTTGACAGGAAAGACGATCACGCTAGAGGTGGAGAGTTC 22221588 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | ||||| | || ||| ||||| || ||||| || || || || ||||| || Sbjct 22221587 CGACACCATTGACAACGTGAAAGCCAAAATCCAGGACAAGGAGGGTATTCCTCCCGACCA 22221528 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | ||| || || ||||||||||| | |||| | | |||||||| Sbjct 22221527 GCAGAGGCTTATCTTCGCTGGGAAGCAATTGGAAGATGGCAGGACCTTGGCTGATTACAA 22221468 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| |||||||| || | || ||||| |||||| | || || ||||| Sbjct 22221467 CATTCAGAAGGAGTCTACGCTTCACTTGGTCTTGCGTCTACGTGGAGGCAT 22221417 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| || ||| |||| ||| | || || ||| ||| Sbjct 22221874 ATGCAAATCTTCGTTAAGACTTTGACGGGAAAGACTATCACTTTGGAGGTTGAAAGCTCC 22221815 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || || ||||||||||| || || ||||| || || Sbjct 22221814 GACACTATTGACAACGTCAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAG 22221755 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || || |||| || || ||| | | ||||||||| Sbjct 22221754 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAGGATGGTCGCACCTTGGCAGATTACAAC 22221695 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || ||||| |||||| | || || ||||| Sbjct 22221694 ATCCAGAAGGAGTCTACGCTTCACTTGGTCTTGCGTCTACGTGGAGGCAT 22221645 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 ||||||||||| | || || || || ||||| |||||| | ||||| | ||||| Sbjct 22221347 TGACCGGCAAGACCATCACACTGGAGGTGGAGAGCTCCGACACCATTGACAACGTCAAGG 22221288 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || || |||||||| ||||| || || || || || |||||| | || | ||| || | Sbjct 22221287 CCAAGATCCAAGACAAGGAAGGTATCCCTCCGGACCAGCAGCGTCTCATCTTCGCTGGAA 22221228 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | || | || || || ||| | | || |||||||| || ||||||||||| | | Sbjct 22221227 AGCAGCTCGAGGATGGTCGCACCTTAGCAGACTACAACATCCAGAAGGAGTCGACACTTC 22221168 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | ||||| | ||| | || ||||| || Sbjct 22221167 ACTTGGTCCTCCGTCTCCGTGGTGGTAT 22221140 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||||||||| ||| | || ||| | || || ||| ||| Sbjct 22222102 ATGCAGATCTTTGTTAAAACTCTGACCGGAAAGACGATCACTTTGGAGGTTGAAAGCTCC 22222043 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || || || || || || || || ||||| || || Sbjct 22222042 GATACCATCGACAACGTTAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAG 22221983 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||||| || ||||| || | || || |||| |||||| Sbjct 22221982 CAGAGGCTCATCTTTGCCGGCAAGCAGTTGGAGGATGGAAGAACTCTTGCCGACTACAAC 22221923 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 22221922 ATCCAGAAGGAGTCGAC 22221906 >seq5 Length=23960834 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || | || || ||| | || || || || ||||| || Sbjct 16975075 CATGCAGATCTTTGTCAAGACCTTAACGGGAAAGACGATCACACTCGAGGTGGAGAGCTC 16975134 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | ||||| || || || ||||| || || || || ||||| || Sbjct 16975135 CGACACCATCGATAACGTCAAGGCTAAGATACAGGACAAGGAGGGAATCCCGCCCGACCA 16975194 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||||| || | |||||||| || ||||| || || || | |||| ||||| Sbjct 16975195 GCAGCGTTTGATCTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACATTGGCCGACTACAA 16975254 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| ||||||||||| | ||| | || || ||| |||| || ||||| Sbjct 16975255 CATTCAGAAGGAGTCGACTCTTCATCTCGTGTTACGTCTGCGTGGAGGCAT 16975305 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||| | || || | || || ||| | || || ||||| |||||| || Sbjct 16974848 ATGCATATCTTTTTCAAGACCTTAACGGGAAAGACGATCACCCTTGAGGTGGAAAGCTCT 16974907 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || ||||||||||| || ||||| || || ||||| Sbjct 16974908 GACACCATCGACAATGTTAAAGCCAAGATTCAAGACAAGGAGGGCATTCCTCCGGATCAG 16974967 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||| || || | || ||| | ||| | ||||||||||| Sbjct 16974968 CAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGGAGAACCCTAGCCGATTACAAC 16975027 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| ||||| | || | | | || |||||||| Sbjct 16975028 ATCCAGAAGGAGTCGACTCTACATCTCGTCCTCAGGCTCCGTGGTGGCAT 16975077 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || ||| | || || ||||| |||||| || Sbjct 16974620 ATGCAGATCTTCGTTAAGACACTCACGGGAAAGACGATCACCCTTGAGGTGGAAAGCTCT 16974679 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || ||||||||||| || || || || || ||||| Sbjct 16974680 GACACCATCGACAATGTTAAAGCCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATCAG 16974739 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || |||||| || || | || || | ||| | ||||||||||| Sbjct 16974740 CAGAGGCTCATCCTCGCCGGAAAGCAGCTCGAGGAGGGGAGAACCCTAGCCGATTACAAC 16974799 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 | || ||||||||||| ||||| Sbjct 16974800 ACCCAGAAGGAGTCGACTCTACAT 16974823 >seq7 Length=22597724 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || ||| | || || || || || ||| | ||| Sbjct 8143825 ATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTCGAATCATCC 8143766 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || ||||| ||||| ||||| || || || || || Sbjct 8143765 GACACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGTATCCCTCCGGACCAG 8143706 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||| || || |||||||| | ||| | | || |||||| Sbjct 8143705 CAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGGAGGACGCTCGCGGACTACAAC 8143646 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || || ||||||||||| | || ||||| Sbjct 8143645 ATCCAGAAGGAGTCGACGCTTCACTTGGT 8143617 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | || || || || || || | ||| Sbjct 13483401 ATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACCCTCGAGGTCGAGTCCTCC 13483460 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| |||||||| || || || || Sbjct 13483461 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 13483520 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| ||||| | |||||| | ||| | |||| |||||| Sbjct 13483521 CAGCGACTCATCTTCGCCGGGAAACAGCTCGAAGACGGCCGTACCCTCGCCGACTACAAC 13483580 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || ||||||||||| | ||| | || | ||| | || |||||| Sbjct 13483581 ATCCAGAAGGAGTCGACGCTTCATCTCGTCCTCCGTCTCCGTGGTGGC 13483628 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 27078 CAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTG 27137 || ||||||||||| ||||| || ||||||||| | | |||| ||| || || ||| | Sbjct 5292410 CAGGACAAAGAAGGAATACCGCCGGATCAACAGAGGCTGATATTCGCTGGGAAGCAACTA 5292469 Query 27138 GAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 ||||| || ||| || | || |||||||| || || ||||| || | || ||||| Sbjct 5292470 GAAGATGGTAGAACCCTTGCGGACTACAACATCCAGAAAGAGTCAACGCTTCACTTGGTC 5292529 Query 27198 TTGCGTTTGCGGGGTGGCA 27216 ||| | | ||||||||| Sbjct 5292530 TTGAGGCTTAGGGGTGGCA 5292548 >seq6 Length=26286742 Score = 116 bits (128), Expect = 3e-21 Identities = 171/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||||||||| | || || ||||| ||||| || Sbjct 15797639 CATGCAGATTTTCGTTAAGACATTGACCGGCAAGACGATCACGCTTGAGGTGGAGAGCTC 15797698 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | ||||| | || || || || |||||||| |||||||| || || || || Sbjct 15797699 CGACACTATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCA 15797758 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| || || || | || || || ||| | |||| ||||| Sbjct 15797759 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTAGCCGACTACAA 15797818 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACAC 27226 ||| || |||||||| || | || ||||| | ||| | || |||||| | |||| | Sbjct 15797819 CATCCAGAAGGAGTCCACGCTTCACTTGGTCCTCCGTCTCCGTGGTGGCTTCTGAAACTC 15797878 Query 27227 TT 27228 || Sbjct 15797879 TT 15797880 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| || ||| |||| || ||| | |||||| | || ||||| || Sbjct 15797183 CATGCAAATTTTTGTCAAGACTTTGACGGGGAAGACGATTACTTTGGAGGTGGAGAGCTC 15797242 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| || ||||| || || || || || ||||| || || Sbjct 15797243 TGACACTATTGATAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCGGACCA 15797302 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || |||| |||||||| || ||||| || | ||| | | || ||||| Sbjct 15797303 GCAGAGGTTGATATTTGCCGGCAAGCAGTTGGAGGATGGAAGGACTCTAGCTGACTACAA 15797362 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| || |||||||| | || ||||| |||||| | || || || || Sbjct 15797363 CATTCAGAAAGAGTCGACTCTCCACTTGGTCTTGCGTCTACGTGGAGGTAT 15797413 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||||||||| | || || ||||| ||||| || Sbjct 15796727 CATGCAGATTTTCGTTAAGACATTGACCGGCAAGACGATCACGCTTGAGGTGGAGAGCTC 15796786 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | ||||| | || || || || |||||||| |||||||| || || || || Sbjct 15796787 CGACACTATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCA 15796846 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| |||||||| | || || || || | | || ||||| Sbjct 15796847 GCAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCGGACTACAA 15796906 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || | ||| | || | | | || |||||||| Sbjct 15796907 CATCCAGAAGGAGTCTACTCTTCATCTCGTCCTCAGGCTCCGTGGTGGCAT 15796957 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || || ||||||||| | || || | || || || || Sbjct 15797412 ATGCAGATATTTGTGAAGACCCTTACCGGCAAGACCATCACATTGGAGGTTGAGAGTTCG 15797471 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || |||||||| |||||||| || || || || Sbjct 15797472 GACACTATTGATAAAGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAG 15797531 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| |||||||| | || || || || | | || |||||| Sbjct 15797532 CAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGTCGTACTTTGGCGGACTACAAC 15797591 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || ||||| | | | || |||||||| Sbjct 15797592 ATCCAGAAGGAGTCTACTCTCCACTTGGTGCTAAGGCTTCGTGGTGGCAT 15797641 >seq3 Length=31725688 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||||| ||| |||| ||| | || || || || Sbjct 13310972 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACTATCACTTTGGAGGTTGAGAGCTCT 13311031 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || || || || || || || ||||| || || Sbjct 13311032 GACACTATTGACAATGTTAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAG 13311091 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||||| || || |||||||| || ||| | | ||||||||| Sbjct 13311092 CAGAGGTTGATCTTTGCCGGAAAGCAGTTGGAAGATGGTCGCACCTTGGCGGATTACAAC 13311151 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| || | || ||||| |||||| | || || ||||| Sbjct 13311152 ATTCAGAAAGAGTCAACTCTTCACTTGGTCTTGCGTCTACGTGGAGGCAT 13311201 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || ||||| ||||| ||| Sbjct 13311428 ATGCAGATTTTCGTTAAGACCTTGACCGGCAAGACCATCACACTTGAGGTGGAGAGCTCC 13311487 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || |||||||| |||||||| || || || || Sbjct 13311488 GACACCATTGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCAG 13311547 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || || || | || || || ||| | | || |||||| Sbjct 13311548 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCAGACTACAAC 13311607 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||| || | || ||||| | ||| | || || || Sbjct 13311608 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGTCTCCGTGGAGG 13311654 >seq10 Length=17599535 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| || ||| |||| |||||| |||| || | ||||| || || Sbjct 17168593 ATGCAAATATTTGTGAAGACTTTGACAGGCAAGACTATAACCTTGGAAGTTGAGAGCTCA 17168652 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || ||||| ||||| ||||| || || || || ||| Sbjct 17168653 GACACGATAGACAACGTGAAGGCTAAGATTCAGGACAAGGAAGGGATTCCTCCGGACCAA 17168712 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || ||||| | || || || ||| | | ||||||||| Sbjct 17168713 CAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTAGGACTTTGGCTGATTACAAC 17168772 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || | || |||||| | || ||||| Sbjct 17168773 ATCCAGAAGGAGTCGACTCTTCACCTTGTGTTGCGTCTTCGTGGTGG 17168819 >seq4 Length=18984343 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || || | || || || || || || | ||| Sbjct 357692 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATCACCCTCGAGGTCGAGTCCTCC 357633 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||| |||||||| || || || || Sbjct 357632 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGACCAG 357573 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || | || ||| | |||| | |||| |||||| Sbjct 357572 CAGCGGCTGATCTTCGCCGGGAAGCAGCTCGAGGACGGGAGGACCCTCGCCGACTACAAC 357513 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 357512 ATCCAGAAGGAGTCGAC 357496 >seq3787 Length=174 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || ||||| ||||| ||||| || || || || || |||||| | || | |||||| || Sbjct 169 AAGATTCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGTCTGATCTTCGCCGGGAAG 110 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || |||||||| | ||| | | ||||||||||| || ||||||||||| | || Sbjct 109 CAGCTGGAAGACGGAAGGACACTCGCGGATTACAACATCCAGAAGGAGTCGACTCTTCAC 50 Query 27192 TTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| | ||| || |||| || Sbjct 49 CTGGTTCTCCGTCTGAGGGGAGG 27 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434699587116480