Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_028834.1 Length=48216 Score E Sequences producing significant alignments: (Bits) Value seq12143 80.6 8e-11 >seq12143 Length=88452 Score = 80.6 bits (88), Expect = 8e-11 Identities = 55/61 (90%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340 |||||||||||||| | ||||||| |||||| ||||||||||| ||||||||||||||| Sbjct 1933 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 1992 Query 36341 C 36341 | Sbjct 1993 C 1993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154095913579764