Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20rapa_20[refseq_20GCF_5F000309985.1_202012-11-07] 40,249 sequences; 284,129,391 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq40249 619 2e-172 seq24705 610 8e-170 seq27683 203 4e-47 seq13684 161 1e-34 seq3029 107 2e-18 seq10 104 3e-17 seq34986 82.4 9e-11 >seq40249 Length=153482 Score = 619 bits (686), Expect = 2e-172 Identities = 733/993 (74%), Gaps = 0/993 (0%) Strand=Plus/Minus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 |||||||||||| |||| ||||| |||||||| || | || ||||| || || || Sbjct 1342 TTCTGTAACTGGATAACTAGTACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1283 Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471 |||||||| | | || | ||||| | ||| || ||||| ||||| | |||||| Sbjct 1282 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCT 1223 Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531 || || || || || || || || ||||| ||| |||| ||||| | || || ||||| Sbjct 1222 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAAT 1163 Query 169532 ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATC 169591 || || || ||||| || | || |||| || || ||| | || || || || ||| Sbjct 1162 ATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 1103 Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTC 169651 |||||||| ||| | ||||||||| | |||||||||||||||| |||| |||| Sbjct 1102 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 1043 Query 169652 TTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGT 169711 | ||||| | | || | | ||| |||||||||||||||||| | | ||| Sbjct 1042 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 983 Query 169712 CTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCT 169771 ||||||||||| |||||||| |||||| || || ||||| ||||| || || | ||| Sbjct 982 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 923 Query 169772 GTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATC 169831 |||||| || ||||||| |||| ||||| || ||||| | ||||||||| || ||| Sbjct 922 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 863 Query 169832 TCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCC 169891 || || || || |||| ||| | || ||||| |||||||||||||| || |||||||| Sbjct 862 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 803 Query 169892 TTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGT 169951 || |||||| | ||||| || || || || || || || || ||||| || ||||| ||| Sbjct 802 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 743 Query 169952 AGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGT 170011 | || ||||| ||| | || | |||||||| || || || || || | ||| Sbjct 742 TCTTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 683 Query 170012 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTCGGT 170071 |||| ||||||||||||||||| || |||||||| || || ||||||||||| || || Sbjct 682 TACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGC 623 Query 170072 CGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCA 170131 || ||||||||||||| ||| |||||||| || ||||| | || |||||| | || Sbjct 622 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCG 563 Query 170132 GCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAAC 170191 || ||||| || || || || ||||| || ||| | ||| | || ||||| |||||| Sbjct 562 GCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAC 503 Query 170192 CTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACC 170251 || || |||||||| |||||||| || | | ||| |||| || ||||| | || || Sbjct 502 CTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACT 443 Query 170252 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCT 170311 ||||| || || | ||||||||| ||||| |||||||| ||||| || ||||||||| Sbjct 442 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 383 Query 170312 CACAACTTCCCTCTCGACCTCGCTGCTGCTGAG 170344 |||||||||||||| ||||| ||||||| |||| Sbjct 382 CACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 350 Score = 518 bits (574), Expect = 4e-142 Identities = 722/1009 (72%), Gaps = 2/1009 (0%) Strand=Plus/Plus Query 170605 TGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGGTCTGGACTTCTTCTTT 170664 ||||||||||| | | || || || || ||||| || |||||||| || | || | Sbjct 31945 TGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCT 32004 Query 170665 TTCCCACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCACGACATTTGTTACAAGTT 170724 |||| ||| ||| | || | || || ||| | || || || || ||||| || | Sbjct 32005 TTCCTTGTGCCTATTTCGCTTTGGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 32064 Query 170725 GGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGGTGCTAATTTCCTTACAGCGGCTG 170784 |||| || || ||| | || ||||| || | |||||| ||||| | || || || | Sbjct 32065 GGTATACTCATGGATTGGCTAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAG 32124 Query 170785 TGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 170844 | || || |||||| || | | | |||||| | | |||| ||||||||||| | | Sbjct 32125 TTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 32184 Query 170845 AGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 170904 | || ||||| || |||| ||| | || || || ||| |||||| || ||||||| Sbjct 32185 AAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGGCTTTTGTTGCTCTCCACG 32244 Query 170905 GAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCAGTCG-TCTCGTAGGG 170963 | || || || | |||||||| ||| | || || |||||| | ||| ||| || Sbjct 32245 GTGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCT-GTTCAA 32303 Query 170964 ATTAGACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGTGTTTGTCAGCGTGTTC 171023 | |||| || ||||||||||| ||||||||||| || ||||| ||||| || || Sbjct 32304 TTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTCTTT 32363 Query 171024 CTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCA 171083 || || ||||| || || || || |||||||||| || ||| ||||| || || || Sbjct 32364 CTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCT 32423 Query 171084 ATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGACACTGAATCCATTTCAT 171143 || || || ||| | ||||| | ||||| || || || |||||| |||| ||||||||| Sbjct 32424 ATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 32483 Query 171144 ATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACA 171203 |||||||| || || ||| | || |||| || || | | || |||||||||| ||| Sbjct 32484 ATGATGGGAGTCGCTGGTGTACTGGGCGCGGCTCTGTTATGCGCTATTCATGGTGCTACT 32543 Query 171204 GTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACACG 171263 ||||| |||||||| | ||||||||||||| ||||| || || || ||| || | Sbjct 32544 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 32603 Query 171264 ACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTTCTGGTCGCAGATTTTT 171323 ||||| | ||||| || ||||| |||||||| ||||| || || ||||| || || ||| Sbjct 32604 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTT 32663 Query 171324 GGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTCATG 171383 || | || || |||||| |||||||| |||||||||||| | ||||| || || | Sbjct 32664 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACT 32723 Query 171384 GGTCTTTGGGTCAGTAGTCTGGGGATTATTGGTCTTGCTCTTAATCTTAGGGCTTATGAT 171443 ||| | ||| | ||| ||| || | | ||||| ||| | || || | || ||||| Sbjct 32724 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGAC 32783 Query 171444 TTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTTCGAGACGTTCTATACCAAG 171503 ||||| ||||| || | ||||| |||||||| || || ||||| |||||||| || Sbjct 32784 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTATACTAAA 32843 Query 171504 AACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACCAGTAGACCAACCACATGAA 171563 || || || || || |||||| |||| || |||||||| | ||| || || |||||| Sbjct 32844 AATATTCTTTTAAACGAAGGTATTCGCGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 32903 Query 171564 AACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGCACTTTGAT 171612 ||| || | ||||| ||||| |||||||| ||||| || || |||| || Sbjct 32904 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 32952 >seq24705 Length=1162 Score = 610 bits (676), Expect = 8e-170 Identities = 720/973 (74%), Gaps = 1/973 (0%) Strand=Plus/Plus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 ||||| |||||| |||| |||||| || ||||| || |||| |||||||| || || Sbjct 191 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 250 Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471 |||||||| | | || | ||||| || || || ||||||||||||| ||| || Sbjct 251 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCTGCCCCT 310 Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531 || || || || || || || || || || ||| |||||||| | | ||||| ||||| Sbjct 311 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAAT 370 Query 169532 ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATC 169591 || |||||||||||| || | || |||| || ||||| | ||||| || || || Sbjct 371 ATTATCTCTGGTGCTATTATCCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATT 430 Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTC 169651 |||||||| ||| | | ||||| ||||| ||||| |||||||||| | || |||| Sbjct 431 TGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 490 Query 169652 TTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGT 169711 | |||| | | | || | | ||| |||||||||||||||||| | | ||| Sbjct 491 CTACACTCCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 550 Query 169712 CTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCT 169771 ||||||||||| |||||||| |||||| || || ||||| ||||| || || | ||| Sbjct 551 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 610 Query 169772 GTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATC 169831 |||||| || | ||||| |||| ||||| || ||||| | ||||||| | || ||| Sbjct 611 GTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAATC 670 Query 169832 TCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCC 169891 || || || || |||| ||| | || ||||| |||||||||||||| || |||||||| Sbjct 671 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 730 Query 169892 TTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGT 169951 || |||||| | ||||| || || || || || || || || ||||| || ||||| ||| Sbjct 731 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 790 Query 169952 AGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGT 170011 | || ||||| ||| ||||| | ||||| || || || || || || | ||| Sbjct 791 TCTTTGGTAACTTCTAGT-TTGTCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGT 849 Query 170012 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTCGGT 170071 ||||| || |||||||| ||||| || || || || || || ||||| ||||| || || Sbjct 850 TACAAATTTGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTGGC 909 Query 170072 CGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCA 170131 || | ||||||||||| ||| ||||||||||| ||||| | ||||||||| | || Sbjct 910 CGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCT 969 Query 170132 GCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAAC 170191 || |||||||| || || ||||||||||| ||| | ||| | || ||||| |||||| Sbjct 970 GCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAC 1029 Query 170192 CTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACC 170251 || || |||||||| |||||||| || | | ||| |||| ||||| || | || || Sbjct 1030 CTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACT 1089 Query 170252 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCT 170311 ||||| || | ||||||||||| ||||| |||||||| |||||||| ||||||||| Sbjct 1090 TGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGCT 1149 Query 170312 CACAACTTCCCTC 170324 ||||||||||||| Sbjct 1150 CACAACTTCCCTC 1162 >seq27683 Length=354 Score = 203 bits (224), Expect = 4e-47 Identities = 256/352 (73%), Gaps = 0/352 (0%) Strand=Plus/Minus Query 170992 CTGGTCCTATCGCTGTGTTTGTCAGCGTGTTCCTCATCTATCCTCTTGGGCAGTCAAGTT 171051 ||||||| || ||||| ||||| || ||||| || ||||| || ||||| || ||| Sbjct 354 CTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATCTGGTT 295 Query 171052 GGTTCTTCGCACCTTCCTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTCTTCCTGCAAG 171111 ||||||| || || ||||| || ||||| || || || ||| | || ||| | |||| Sbjct 294 GGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTTTTCTTCCAAG 235 Query 171112 GTTTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTTGCAGGTATCCTCGGCG 171171 | || || || ||||| |||| ||||||||||||||||| ||||| || | | || | Sbjct 234 GATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGTG 175 Query 171172 GTGCATTGCTTTCTGCAATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTG 171231 || |||| | || |||||||| | || ||||| || ||| | | ||| || |||| Sbjct 174 CGGCTCTGCTATGCGCTATTCATGGAGCGACCGTAGAAAACACTCTATTTGAGGACGGTG 115 Query 171232 ATCAAGCAAACACCTTTAAGGCATTTGACACGACTCAGGAGGAAGAGACATATTCTATGG 171291 || ||||| ||||| || ||| || | ||||| | ||||| || ||||| |||| Sbjct 114 ATGGTGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGG 55 Query 171292 TCACTGCTAATCGTTTCTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAA 171343 |||||||||| || || ||||| || || |||||| | || || |||||| Sbjct 54 TCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAA 3 >seq13684 Length=3594 Score = 161 bits (178), Expect = 1e-34 Identities = 198/268 (74%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 171346 GTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCAGTAGTCTGG 171405 ||||||| |||||||||||||| ||||| || |||| ||| | ||| | ||| | | | Sbjct 1 GTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTG 60 Query 171406 GGATTATTGGTCTTGCTCTTAATCTTA-GGGCTTATGATTTCGTAAGTCAGGAGGTCAGA 171464 | | |||| | ||||| || |||| | || ||||| || || ||||| || | Sbjct 61 GCGTAGTTGGCTTGGCTCTGAA-CTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGT 119 Query 171465 GCAGCAGAAGATCCAGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGT 171524 ||||| |||||||| || || ||||| ||||| ||||| || || || || || || ||| Sbjct 120 GCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGT 179 Query 171525 CTTCGTGCATGGATGGCACCAGTAGACCAACCACATGAAAACTTTGTGTTCCCAGAGGAA 171584 ||||||| ||||||||| | || || || |||||||| || | ||||| ||||| Sbjct 180 ATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAG 239 Query 171585 GTTCTACCTCGTGGCAATGCACTTTGAT 171612 |||||||| ||||| || || |||| || Sbjct 240 GTTCTACCACGTGGAAACGCTCTTTAAT 267 >seq3029 Length=7874 Score = 107 bits (118), Expect = 2e-18 Identities = 173/249 (69%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 170605 TGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGGTCTGGACTTCTTCTTT 170664 ||||||||||| | | | || || || || ||||| || |||||||| || | || | Sbjct 249 TGGATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCT 190 Query 170665 TTCCCACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCACGACATTTGTTACAAGTT 170724 |||| ||||||| | || | || || ||| |||| || || || ||||| || || Sbjct 189 TTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 130 Query 170725 GGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGGTGCTAATTTCCTTACAGCGGCTG 170784 |||| ||||| ||| | || ||||| || | |||||| ||||||| | || || || | Sbjct 129 GGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGTAATTTCTTAACCGCAGCAG 70 Query 170785 TGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 170844 | || || ||||| || | | | || ||| | | ||||| ||||| || || | | Sbjct 69 TTTCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCCGAAGCAC 10 Query 170845 AGGGGGATT 170853 | || |||| Sbjct 9 AAGGAGATT 1 >seq10 Length=17599535 Score = 104 bits (114), Expect = 3e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 169829 ATCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCAC 169888 ||||| || || || |||| ||| | || |||| |||||||||||||| || |||||| Sbjct 16803128 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCCGGCTGAGCACAACATTCTTATGCAC 16803187 Query 169889 CCCTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCAC 169948 || || ||||| | ||||| | || || || |||| || | ||||| | ||| | Sbjct 16803188 CCATTTCACATATTAGGTGTAGTTGGTGTATTCAGTGGTTCCTTATTTAGTGTTATGTAT 16803247 Query 169949 GGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTAT 170008 ||| | || ||||| ||| | | | ||||||| | || || || ||| | Sbjct 16803248 GGTTTTTTGGTAACTTCTAGTTTAATTAGGAAAACCACAAAAAATGAATCTGCTAACGAA 16803307 Query 170009 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCA 170058 |||| | ||||||||||||||||| || |||||||| || | ||||| Sbjct 16803308 AGTTATAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAACTGCTCA 16803357 >seq34986 Length=93546 Score = 82.4 bits (90), Expect = 9e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 167448 TACATCCTTGACGCGGCTGAGGAAGCGGGTGTGGACATCAACTACTCGTGCCGTGCAGGC 167507 ||| |||||||||| ||||||||||| || | ||| | ||||| |||||||| || Sbjct 33506 TACGTCCTTGACGCTGCTGAGGAAGCCGGAATCGACTTGCCTTACTCTTGCCGTGCTGGT 33565 Query 167508 GCTTGTTCGTCGTGCGCGGGAAAACTCATCTCTGGCACCGTAGATCAAAGCGATCAATCC 167567 | || ||| || || || ||| | | ||||| | || || || || || Sbjct 33566 TCCTGCTCGAGCTGTGCAGGTAAAGTTGTGTCTGGATCTGTTGACCAGTCTGACCAGAGT 33625 Query 167568 TTCCTGGACGATGATCAAATTGCCGAAGGTTTCCTTCTCACCTGTGTGTCCTATC 167622 ||||| || ||||| || ||||| ||||| ||| ||||||| |||| | | |||| Sbjct 33626 TTCCTCGATGATGACCAGATTGCGGAAGGATTCGTTCTCACTTGTGCGGCTTATC 33680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591900457582480