Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-17 >seq2 Length=36921656 Score = 104 bits (114), Expect = 2e-17 Identities = 285/432 (66%), Gaps = 5/432 (1%) Strand=Plus/Minus Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 || || ||||| ||||| || | |||||||| | | || |||||||| || || || Sbjct 1442776 AGGCAGGCGAAGTCGCAGTGAAGCCCCTCGTCGCGGGAAATGAGTTCGTTGGAGAAAGTG 1442717 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 | || |||||| || || ||||| | ||| || || | | ||| ||||| ||| Sbjct 1442716 AGGCCAGGCATCAAGCCGCGCTTCTTGAGCCAGAAAATGGAGCAGAAGCTTCCAGAGAAG 1442657 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140 || || ||||||||| | || || |||| | || || ||| | | || || Sbjct 1442656 AAGATTCCCTCGACGCAGGCGAAGGCGACGATGCGCTCAGCGAAGGAGTCGGAGGAGT-- 1442599 Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCC 17200 ||| |||| | | |||| | ||| || | | ||| || ||||| ||||| Sbjct 1442598 CGA-TCCAGCGCAGGGCCCATTGGGCCTTCTTGGCAACGCAGGGGATGGTTTCGATGGCG 1442540 Query 17201 TTAAATAATTTCTCTTTTTCCT-GTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259 | || | | | || || | | || || | || || || |||| ||| |||||||| Sbjct 1442539 TGGAAGAGGTGGTGCTTCTCGTCGGAGCTCT-TGATGTAGGTTTCGAGGAGGAGGCTGTA 1442481 Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGC 17319 ||| |||||||| |||||||| ||||| || || || ||||| ||| || || || || Sbjct 1442480 CATCTCGGAGTGGATGTTCTCGATGGCGATTTGGAAGCCGTAGAAGGCGCGAGCCTCGGC 1442421 Query 17320 TATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379 | ||| | ||| ||| || | || ||||| ||| |||||||||||| || Sbjct 1442420 GACTTGGATCTCCTTCATGAAGCGGCCGGCGAGATTCTCGAGGACGATGCCGTCGGAGGC 1442361 Query 17380 GGCGAAAAACGC 17391 ||| || || || Sbjct 1442360 GGCAAAGAAGGC 1442349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517309236924480