Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq27021 84.2 4e-12 >seq27021 Length=265 Score = 84.2 bits (92), Expect = 4e-12 Identities = 138/193 (72%), Gaps = 7/193 (4%) Strand=Plus/Plus Query 15025 TTTCCTGTTTGAGAACTACACCCGAACCGCGCAGGTGCTGGCCGACACAATGGCTGAGGC 15084 |||||| || ||||||||||| || || || || | | || ||||| | ||||| || Sbjct 46 TTTCCT-TTCGAGAACTACACACGCACGGCTCAAATCATTGCTGACACGGTTGCTGAAGC 104 Query 15085 GCACATGTGGGCGGTCGATAAGCC-CATCACCGCATCGCTCATCCGTGACATTGTCGACG 15143 ||| |||||||| |||||||| || | ||| | |||| || | | ||| | | || | Sbjct 105 GCATATGTGGGCAGTCGATAAACCACTTCATC-CATCACTGGCCAGCGACCTCATTGAGG 163 Query 15144 GCATTAACGCCAAATTCCGCGAGCTGA--AATCAAATGGCTACATCGTGGACGGTGAATG 15201 ||||| ||||||| || | || || | ||| || |||||| || ||| |||||| Sbjct 164 GCATTCGCGCCAAACTCAGTGACCTAACCAAT--AACGGCTACCTCATGGGTGGTGAAGC 221 Query 15202 CTGGTTCGACGAG 15214 |||| |||||| Sbjct 222 TTGGTATGACGAG 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97832735376352