Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq11 91.5 1e-13 >seq11 Length=48970052 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| ||||||| |||||||| || || || ||| || ||| || Sbjct 43329174 ATGCAAATTTTCGTCAAAACTTTGACGGGAAAGACTATCACCTTGGAGGTTGAAAGTTCA 43329233 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | || | || || ||| || || || ||| | || ||| || Sbjct 43329234 GATACGATTGATAATGTGAAAGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAG 43329293 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || ||||||||||| || ||||| ||||||||| | ||| | || |||||||| Sbjct 43329294 CAGAGGCTTATCTTTGCTGGGAAACAGCTGGAAGATGGAAGAACCCTTGCGGATTACAAC 43329353 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 || |||||||| || || || ||| |||| || || Sbjct 43329354 ATCCAGAAGGAGTCCACCCTCCACTTGGTTTTGCG 43329388 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || | ||||| ||||| || || ||||| ||| ||| |||| | || Sbjct 43328946 ATGCAGATCTTTGTGAAAACTTTGACCGGTAAGACCATCACCCTCGAGGTGGAAAGCTCA 43329005 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | || || || ||||| || ||| | || |||||| Sbjct 43329006 GACACCATAGACAATGTGAAAGCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGATCAA 43329065 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || || ||||| ||||| || || || || | ||| | ||||||||||| Sbjct 43329066 CAGAGGCTGATTTTTGCTGGCAAGCAGCTCGAGGACGGGAGAACCCTCGCCGATTACAAC 43329125 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||||||| || || || || ||||| |||| ||| |||| || Sbjct 43329126 ATTCAGAAGGAGTCCACCCTCCATTTGGTGCTACGTTTAAGAGGTGG 43329172 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || | ||||| ||||| || || ||||| ||| || |||| | || Sbjct 43336507 ATGCAGATCTTTGTGAAAACTTTGACCGGTAAGACCATCACCCTTGAGGTGGAAAGCTCA 43336566 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | || || || || ||||| ||| | || |||||| Sbjct 43336567 GACACCATCGACAATGTGAAAGCCAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCAA 43336626 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || || ||||| ||||| || || || || | ||| | ||||||||||| Sbjct 43336627 CAGAGGCTGATTTTTGCTGGCAAGCAGCTCGAGGACGGGAGAACCCTCGCCGATTACAAC 43336686 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||||||| || || || || ||||| |||| ||| |||| || Sbjct 43336687 ATTCAGAAGGAGTCCACCCTCCATTTGGTGCTACGTTTAAGAGGTGG 43336733 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||||||||| | ||||| |||| || || ||||||||| || |||| | | Sbjct 43337419 ATGCAAATATTTGTGAAAACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 43337478 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || |||| ||| ||| || || || || | || |||||| Sbjct 43337479 GATACTATTGACAATGTTAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATCAG 43337538 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || ||||| ||||| || || ||| |||||||| || |||| || || ||| Sbjct 43337539 CAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCGGACTATAAT 43337598 Query 29142 ATTCAGAAGGAATCTACT 29159 |||||||||||||| ||| Sbjct 43337599 ATTCAGAAGGAATCCACT 43337616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428145269475080