Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq848 82.4 6e-11 seq11 82.4 6e-11 >seq848 Length=99386 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || |||| || ||||| || || || |||||| || ||| || Sbjct 64068 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACTATTACCTTGGAGGTTGAAAGTTCA 64127 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || |||| |||||| || || || || | || ||| ||| Sbjct 64128 GACACTATTGACAATGTCAAAGCAAAAATCCAAGACAAGGAGGGAATTCCACCAGACCAA 64187 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||||| | |||||||| || || |||||||| ||| | ||| | || |||||||| Sbjct 64188 CAAAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACTCTTGCTGATTACAAC 64247 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 ||||| || || |||||||||||| | || || || Sbjct 64248 ATTCAGAAAGAGTCTACTCTTCACCTTGTCTTGCG 64282 >seq11 Length=48970052 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| ||||||| |||||||| || || || ||| || ||| || Sbjct 43329174 ATGCAAATTTTCGTCAAAACTTTGACGGGAAAGACTATCACCTTGGAGGTTGAAAGTTCA 43329233 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | || | || || ||| || || || ||| | || ||| || Sbjct 43329234 GATACGATTGATAATGTGAAAGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAG 43329293 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || || ||||||||||| || ||||| |||||||| | ||| | || |||||||| Sbjct 43329294 CAGAGGCTTATCTTTGCTGGGAAACAGCTGGAAGATGGAAGAACCCTTGCGGATTACAAC 43329353 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| |||| || || Sbjct 43329354 ATCCAGAAGGAGTCCACCCTCCACTTGGTTTTGCG 43329388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410613879373904