Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2 199 4e-46 seq8 95.1 1e-14 seq11 91.5 1e-13 seq706 89.7 5e-13 seq537 86.0 6e-12 >seq2 Length=36921656 Score = 199 bits (220), Expect = 4e-46 Identities = 501/749 (67%), Gaps = 13/749 (2%) Strand=Plus/Plus Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604 |||||| || || | || || | || ||| | |||||||| || || ||||| || || Sbjct 1442198 CATGTTCCCAATCCAGTACCCCCAAATCTGGGAAATGTACAAGAAAGCCGAAGCCTCTTT 1442257 Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGA 57664 ||||| | || || || ||||| || |||| || || | ||||| ||||||| || Sbjct 1442258 CTGGACGGCGGAGGAGGTCGACCTCTCGCAGGACCTCCGCCACTGGGACTCCCTCACCGA 1442317 Query 57665 ATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGT 57724 || | | || | | ||||| | || || || ||||| ||||| || || || Sbjct 1442318 CGGCGAACGCCACTTCGTCACCCACGTCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGT 1442377 Query 57725 TAACGAGAATTTGGTCGAAAGATTTTCAC-AAGAAG-TGCAAGTGACGGAGGCGAGATGC 57782 ||||||| | | || | || || ||| || | ||||| | ||||| | | Sbjct 1442378 CCTCGAGAATCTCGCCGGCCGCTT--CATGAAGGAGATCCAAGTCGCCGAGGCTCGCGCC 1442435 Query 57783 TTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATC 57842 || ||||| || ||| | ||||| || ||| | || || || ||||| || ||| || Sbjct 1442436 TTCTACGGCTTCCAAATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTCCTC 1442495 Query 57843 GATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATG 57902 || || ||| | ||| | ||||||||| | || ||| |||| |||||||| || Sbjct 1442496 GAAACCTACATCAAGAGCTCCGACGAGAAGCACCACCTCTTCCACGCCATCGAAACCATC 1442555 Query 57903 CCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCAC 57961 ||| ||| | ||||||||||| | ||| | | ||||| | | || | | | | Sbjct 1442556 CCCTGCGTT-GCCAAGAAGGCCCAATGGGCCCTGCGCTGGATCGA---CTCCTCCGACTC 1442611 Query 57962 GTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT 58021 ||||| ||| | | |||| |||||| |||||| || || ||||| || || ||||| Sbjct 1442612 CTTCGCTGAGCGCATCGTCGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCTGGAAGCTT 1442671 Query 58022 -TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACG 58080 ||| || | || ||| | ||||| |||||| ||||||| ||||| || || ||||| Sbjct 1442672 CTGCTCCATT-TTCTGGCTCAAGAAGCGCGGCTTGATGCCTGGCCTCACTTTCTCCAACG 1442730 Query 58081 AGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACA 58140 | | || || ||||||||||| || || || || || ||||| ||||||||| Sbjct 1442731 AACTCATTTCCCGCGACGAGGGGCTTCACTGCGACTTCGCCTGCCTCTTGTACTCTCTGC 1442790 Query 58141 TTGTCAATAAACCGACGCG-GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATC 58199 | || || | | ||| ||| ||| | ||| || | | || || || | ||| Sbjct 1442791 TGAGGAAGAAGCTCA-GCGAGGAGCGCGTGAAGGAGATCGTGAGGGACGCTGTGGATATC 1442849 Query 58200 GAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTG 58259 || | |||||||| ||| || || ||| || |||| || ||||| || ||| Sbjct 1442850 GAGAGGGAGTTTGTGTGCGACGCGCTTCCGTGCGCGTTGCTGGGGATGAATGGGGAGTTG 1442909 Query 58260 ATGTCAAAGTACATTGAGTTTGTTGCCGA 58288 ||| |||||||||||||||| || || Sbjct 1442910 ATGGGTCAGTACATTGAGTTTGTGGCGGA 1442938 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| |||| || ||| || Sbjct 32545437 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACAATCACCCTCGAGGTCGAAAGCTC 32545378 Query 31252 CGACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||||| |||| |||| |||| ||| | |||||||||||| | || || |||| Sbjct 32545377 CGACACCATCGACAACGTGAAAACTAAGA-TCCAGGACAAGGAAGGAATCCCCCCAGACC 32545319 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 ||||| | | || ||||| ||||| ||| | || ||| || | || |||| Sbjct 32545318 AGCAGAGGTTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCTGACTATA 32545259 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||| || || || || |||||||| |||| Sbjct 32545258 ACATCCAGAAGGAGTCAACTCTTCACTTGGT 32545228 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| || |||||| |||| || ||| || Sbjct 32545664 ATGCAAATCTTCGTTAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAAAGCTCT 32545605 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || |||||||||||| | || || |||||| Sbjct 32545604 GACACCATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGAATTCCCCCGGACCAG 32545545 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| || || ||| | || ||| || | || || ||| Sbjct 32545544 CAACGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGACGCACCCTCGCTGACTACAAC 32545485 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| || ||||| || || || Sbjct 32545484 ATCCAGAAGGAATCAACCCTTCACCTCGTCCT 32545453 >seq8 Length=20383548 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| || || || || || |||||||| ||| | || || || | || Sbjct 13445245 ATGCAGATTTTCGTGAAAACCCTAACGGGTAAAACGATAACCCTGGAGGTGGAGTCTTCG 13445186 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| || | |||||||||||| Sbjct 13445185 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATTCCGCCCGACCAG 13445126 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || |||||||| || || ||| |||| ||| || | ||| || ||| Sbjct 13445125 CAGCGCCTCATATTCGCCGGAAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTACAAC 13445066 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || ||||| || || || || || Sbjct 13445065 ATCCAGAAGGAGTCGACGCTCCACCTCGTCCT 13445034 >seq11 Length=48970052 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || ||||||||||| || || || ||| | || || ||| || Sbjct 43337419 ATGCAAATATTTGTGAAAACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 43337478 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | | || || | | || || || || ||||||||| ||| | || || || || Sbjct 43337479 GATACTATTGACAATGTTAAAGCAAAG-ATTCAGGACAAGGAGGGCATTCCACCAGATCA 43337537 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || ||||| || || |||||||| | || || || ||||| Sbjct 43337538 GCAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCGGACTATAA 43337597 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || ||||| ||| | ||||| || ||| Sbjct 43337598 TATTCAGAAGGAATCCACTTTACATCTTGTGCTT 43337631 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||||||||| || ||| |||| || || || |||||| | || |||||| || Sbjct 43329173 CATGCAAATTTTCGTCAAAACTTTGACGGGAAAGACTATCACCTTGGAGGTTGAAAGTTC 43329232 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || ||| | || ||||||||| || | || || ||||| Sbjct 43329233 AGATACGATTGATAATGTGAAAGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCA 43329292 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGA--CTATGAGCGATTAT 31369 |||| | || || || ||||| |||||| ||||||| | | || | || | ||||| Sbjct 43329293 GCAGAGGCTTATCTTTGCTGGGAAACAGCTGGAAGA-TGGAAGAACCCTTGCG-GATTAC 43329350 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| || || || || || || || |||| Sbjct 43329351 AACATCCAGAAGGAGTCCACCCTCCACTTGGT 43329382 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || ||| | ||||| || || || ||| | || || ||| || Sbjct 43329858 ATGCAAATATTTGTGAAAACTTTAACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 43329917 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | | || | || || || ||| | ||||||||||||| | || || ||||| Sbjct 43329918 GATACTATTGACAGTGTGAAGGCAAAGATTCA-GGACAAGGAAGGCATTCCCCCGGACCA 43329976 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || ||||| || || |||||||| | || || ||||| || Sbjct 43329977 GCAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCTGATTACAA 43330036 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| ||||| || || | ||||| || ||| Sbjct 43330037 TATTCAGAAAGAGTCCACCTTACATCTTGTTCTT 43330070 >seq706 Length=122390 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| ||||||| || || || ||| | || ||||| || Sbjct 22561 ATGCAGATCTTTGTGAAGACTTTGACAGGAAAGACAATTACCTTGGAGGTTGAGAGTTCA 22502 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | ||| ||||||||| || | || || |||||| Sbjct 22501 GATACAATTGATAATGTCAAGGCTAAAATTCAGGACAAGGAGGGAATCCCACCAGACCAG 22442 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||| || || |||||||| | |||| | || |||||| Sbjct 22441 CAGAGGTTGATCTTTGCTGGGAAGCAATTGGAAGATGGAAGGACTCTTGCTGACTATAAC 22382 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| ||||| || |||||||| || || Sbjct 22381 ATTCAGAAAGAGTCTACTCTTCACCTTGT 22353 >seq537 Length=160394 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 |||||||||||| | || || ||||||||| | | || |||||||| || ||| |||| Sbjct 154870 GGACAAGGAAGGTATCCCTCCTGACCAGCAGAGGTTGATTTTCGCTGGTAAGCAGCTGGA 154811 Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| | ||| | ||||||||||| ||||| ||||| || |||||| |||| | Sbjct 154810 AGATGGTCGCACTCTTGCTGATTATAACATACAAAAGGAATCAACACTTCATTTGGTGTT 154751 Query 31405 TAGACTGAGGGGCGG 31419 || || ||||| || Sbjct 154750 GAGGCTCAGGGGAGG 154736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445562818485120