Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq26509 87.8 4e-13 seq27021 86.0 1e-12 >seq26509 Length=271 Score = 87.8 bits (96), Expect = 4e-13 Identities = 167/246 (68%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 2596 GTGAACTGGCGCCCACCGGCCGTGATGGTCTTGCGGATAGCCATCAGCGCCTGGGCCAGG 2655 ||||| ||||| || | | || |||||||| ||| ||||| | || || | Sbjct 261 GTGAATTGGCGACCTGAGCCTGTCATGGTCTTTTTGATGGCCATAAAGCTTTGTGCGACA 202 Query 2656 TCGGTCCAGCCGGCGTCGAATTCGAGGCGGCCGTTCTTGATCACTGACCAGGCCTTCATG 2715 ||||||||||| || || || || | || || | | | ||| | ||| |||| Sbjct 201 TCGGTCCAGCCTGCATCAAACTCAAAACGACCTTGATGAACCACATCCATGGCTTTCAGT 142 Query 2716 ACCAACTGCGTCTTCACCTCGGGCGAGTAGCTGAAGGTGCGCACCCCCGGGAAGAACTGG 2775 |||||| || || ||||| ||| ||||| || ||| | | |||||||||||| Sbjct 141 ACCAACATTGTTTTAACCTCTACCGAATAGCTAAAAGTGGTTAGTGCTGGGAAGAACTGG 82 Query 2776 CGCACCAGCTGCGCGACGCCAGAGCCCATGCCGGTGGTGTCGACGCCGATGTAGGTGACC 2835 || |||| || || || || | |||||||| |||||||| | || |||||||| || Sbjct 81 CGTACCAATTGGGCAACCCCTGTCCCCATGCCTGTGGTGTCTAAACCAATGTAGGTCACA 22 Query 2836 CAGTAG 2841 | |||| Sbjct 21 CGGTAG 16 >seq27021 Length=265 Score = 86.0 bits (94), Expect = 1e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 17759 GGATTCCGTTTCTGGGGTTCGCGCACCTGCAGCGATGATCCGCTGTTCGCCTTCGAGAAC 17818 || || || || ||||| || || |||||| || || || || | ||||||||| Sbjct 1 GGCTTTCGCTTTTGGGGCTCTCGTACCTGCGACGCGGAAGGACTATTTCCTTTCGAGAAC 60 Query 17819 TACACCCGCACCGCCCAGGTGCTGGCCGACACTATCGCCGAAGCGCACATGTGGGCGGTT 17878 ||||| ||||| || || | | || ||||| | || |||||||| |||||||| || Sbjct 61 TACACACGCACGGCTCAAATCATTGCTGACACGGTTGCTGAAGCGCATATGTGGGCAGTC 120 Query 17879 GACAAGCCCATGCACCCGTCACTGGTGCGCGACATCCTTGAGGGC 17923 || || || | || || ||||||| ||||| || |||||||| Sbjct 121 GATAAACCACTTCATCCATCACTGGCCAGCGACCTCATTGAGGGC 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113685054624544