Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2 138 2e-27 >seq2 Length=36921656 Score = 138 bits (152), Expect = 2e-27 Identities = 389/583 (67%), Gaps = 16/583 (3%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| || ||| ||| | | || |||||||||||||| || || | ||||| || | Sbjct 1442200 TGTTCCCAATCCAGTACCCCCAAATCTGGGAAATGTACAAGAAAGCCGAAGCCTCTTTCT 1442259 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||||| || |||||||| || || ||||||| | | ||||| | | | || | Sbjct 1442260 GGACGGCGGAGGAGGTCGACCTCTCGCAGGACCTCCGCCACTGGGACTCCC---TCACCG 1442316 Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | || || | || | | ||| | | ||||||||||||| |||||| || |||| Sbjct 1442317 ACGGCGAACGCCACTTCGTCACCCACGTCCTCGCCTTCTTTGCCGCCTCCGACGGCATCG 1442376 Query 125176 TCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTC-CAGAGGTGTCGTG 125233 || ||| ||||| | | | || ||| | ||| | | | || | |||| ||| | Sbjct 1442377 TCCTCGAGAATCTCGCCGGC-CGCTTCATGAAGGAGATC-CAAGTCGCCGAGGC-TCGCG 1442433 Query 125234 CTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 | || ||||| ||||||||| || |||||| | ||||| || |||||| || Sbjct 1442434 CCTTCTACGGCTTCCAAATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTCC 1442493 Query 125293 TTGACATGTACATTCGCGATCCGCAACGTAAA-CACATGCTCTTTAACGCAATCGACACG 125351 | || | ||||| | || | | ||| || ||| ||||| |||| ||||| || Sbjct 1442494 TCGAAACCTACAT-CAAGAGCTCCGACGAGAAGCACCACCTCTTCCACGCCATCGAAACC 1442552 Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCT 125411 | || | | || ||||| ||||||| | || |||||||| | | | || Sbjct 1442553 ATCCCCTGCGTTGCCAAGAAGGCCCAATGGGCCCTGCGCTGGATCGACTCCTCCGACTCC 1442612 Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGT 125471 | ||| || | | || || |||||| ||| ||||| |||||||| || || || Sbjct 1442613 TT---CGCTGAGCGCATCGTCGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCTGGAAGC 1442669 Query 125472 TT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530 || ||| |||| || ||||||||||||||||| | ||||| || || || | || Sbjct 1442670 TTCTGCT-CCATTTTCTGGCTCAAGAAGCGCGGCTTGATGCCTGGCCTCACTTTCTCCAA 1442728 Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 ||| | || || || |||||||| || ||||| ||||| ||| Sbjct 1442729 CGAACTCATTTCCCGCGACGAGGGGCTTCACTGCGACTTCGCC 1442771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740720758263360