Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_004745.1 Length=30728 Score E Sequences producing significant alignments: (Bits) Value seq27021 82.4 1e-11 >seq27021 Length=265 Score = 82.4 bits (90), Expect = 1e-11 Identities = 123/171 (72%), Gaps = 3/171 (2%) Strand=Plus/Plus Query 17318 TTCCTCTTTGAAAGCTACACACGCACCGCGCAGGTACTGGCCGACACGATGGCTGAGGCG 17377 ||||| || || | |||||||||||| || || | | || |||||| | ||||| ||| Sbjct 47 TTCCT-TTCGAGAACTACACACGCACGGCTCAAATCATTGCTGACACGGTTGCTGAAGCG 105 Query 17378 CACATGTGGGCTATTGATAAGCC-CATCACCGCAACGCTGATTCGCGACATCATTGACGG 17436 || |||||||| | ||||| || | ||| | || | ||| ||||| ||||||| || Sbjct 106 CATATGTGGGCAGTCGATAAACCACTTCATC-CATCACTGGCCAGCGACCTCATTGAGGG 164 Query 17437 CATCAATGCCAAATTCCGTGAACTGAAAAACAACGGTTATATCGTGGATGG 17487 ||| |||||| || |||| || | || ||||| || || ||| ||| Sbjct 165 CATTCGCGCCAAACTCAGTGACCTAACCAATAACGGCTACCTCATGGGTGG 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98165390986080