Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq11 82.4 5e-11 >seq11 Length=48970052 Score = 82.4 bits (90), Expect = 5e-11 Identities = 143/207 (69%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 33166 ATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTG 33225 ||| || || |||||||| || ||||||||||||| ||| | | || |||||||| Sbjct 43330061 ATGTAAGGTGGACTCTTTCTGAATATTGTAATCAGCCAAGGTACGACCATCTTCCAATTG 43330002 Query 33226 CTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATC-- 33283 ||| ||| ||| || | | |||||||||| ||| |||||||| || || |||| Sbjct 43330001 CTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGAATCTT 43329942 Query 33284 -GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCC 33342 ||| || || | | ||| || || | || || |||| || || || || || Sbjct 43329941 TGCC---TTCACACTGTCAATAGTATCAGAGCTTTCCACCTCCAAGGTAATGGTCTTCCC 43329885 Query 33343 CGTAAGAGTTTTTACGAAAATTTGCAT 33369 || | |||||| || || |||||||| Sbjct 43329884 TGTTAAAGTTTTCACAAATATTTGCAT 43329858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318635653913328