Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq10 145 1e-30 seq1 120 5e-23 seq4 113 7e-21 seq293 111 2e-20 seq11 104 4e-18 seq195 91.5 2e-14 >seq10 Length=22571102 Score = 145 bits (160), Expect = 1e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || |||||||| || |||||||| |||||||| || || ||| |||||||| | ||| Sbjct 2518881 CTGCGCGATAACATTCAGGGAATCACGAAGCCAGCGATTCGGCGTTTGGCTCGTAGGGGT 2518822 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||||||| || || ||| |||| || |||| ||||| ||| | ||||||||| Sbjct 2518821 GGCGTCAAGCGTATCAGCGGTTTGATCTACGAGGAGACTCGTGGGGTTCTCAAGATCTTC 2518762 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| ||| || | ||| || | ||| ||||||||||| | | | ||||| ||| Sbjct 2518761 TTGGAGAACGTCATTCGTGACGCCGTTACCTACACCGAGCACGCCAGAAGAAAGACCGTC 2518702 Query 16634 ACCTCCATGGATATCGTCTATGC 16656 ||| ||||||| |||| || || Sbjct 2518701 ACCGCCATGGACGTCGTTTACGC 2518679 >seq1 Length=17676265 Score = 120 bits (132), Expect = 5e-23 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || |||||||| || || ||||||||||| || || ||| | |||| | | || Sbjct 6106079 TCTCCGCGATAACATTCAGGGCATCACCAAGCCTGCAATTCGTAGATTGGCGAGAAGGGG 6106020 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| || ||| | || ||| ||| |||| ||||||| | | ||| | ||||| || Sbjct 6106019 TGGTGTTAAGAGAATCAGTGGCTTGATCTACGAAGAGACCAGAGGGGTTCTAAAGATTTT 6105960 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 | | ||| ||| || | ||||||| || ||| ||||||||||||| | |||||||| Sbjct 6105959 CTTGGAGAACGTGATTCGTGATGCTGTCACCTACACCGAGCACGCTAGGAGGAAGACTGT 6105900 Query 16633 CACCTCCATGGATATCGTCTATGC 16656 || |||||||| |||| ||||| Sbjct 6105899 TACTGCCATGGATGTCGTTTATGC 6105876 Score = 120 bits (132), Expect = 5e-23 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || |||||||| || || ||||||||||| || || ||| | |||| | | || Sbjct 6120615 TCTCCGCGATAACATTCAGGGCATCACCAAGCCTGCAATTCGTAGATTGGCGAGAAGGGG 6120556 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| || ||| | || ||| ||| |||| ||||||| | | ||| | ||||| || Sbjct 6120555 TGGTGTTAAGAGAATCAGTGGTTTGATCTACGAAGAGACCAGAGGGGTTCTCAAGATTTT 6120496 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 | | ||| ||| || | ||||||| || ||| ||||||||||||| | |||||||| Sbjct 6120495 CTTGGAGAACGTGATTCGTGATGCTGTCACCTACACCGAGCACGCTAGGAGGAAGACTGT 6120436 Query 16633 CACCTCCATGGATATCGTCTATGC 16656 || |||||||| |||| ||||| Sbjct 6120435 TACTGCCATGGATGTCGTTTATGC 6120412 Score = 87.8 bits (96), Expect = 3e-13 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 16459 AGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGT 16518 ||| ||||| || || |||||||| || | || ||| | |||| | | ||||| || Sbjct 10151336 AGAGAACATTCAGGGCATCACCAAACCTACGATTCGTAGGTTGGCGAGAAGAGGTGGTGT 10151395 Query 16519 CAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAA 16578 ||| | || ||| ||| |||| ||||||| | | ||| | ||||| ||| | | Sbjct 10151396 TAAGAGAATCAGTGGTTTGATCTACGAAGAGACCAGAGGAGTTCTCAAGATTTTCTTGGA 10151455 Query 16579 GACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTC 16638 || ||| || | |||||| || ||| ||||||||||||| | |||||||| || | Sbjct 10151456 GAACGTGATTCGCGATGCTGTCACCTACACCGAGCACGCTAGGAGGAAGACTGTTACTGC 10151515 Query 16639 CATGGA 16644 |||||| Sbjct 10151516 CATGGA 10151521 Score = 87.8 bits (96), Expect = 3e-13 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 16459 AGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGT 16518 ||| ||||| || || |||||||| || | || ||| | |||| | | ||||| || Sbjct 10412832 AGAGAACATTCAGGGCATCACCAAACCTACGATTCGTAGGTTGGCGAGAAGAGGTGGTGT 10412891 Query 16519 CAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAA 16578 ||| | || ||| ||| |||| ||||||| | | ||| | ||||| ||| | | Sbjct 10412892 TAAGAGAATCAGTGGTTTGATCTACGAAGAGACCAGAGGAGTTCTCAAGATTTTCTTGGA 10412951 Query 16579 GACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTC 16638 || ||| || | |||||| || ||| ||||||||||||| | |||||||| || | Sbjct 10412952 GAACGTGATTCGCGATGCTGTCACCTACACCGAGCACGCTAGGAGGAAGACTGTTACTGC 10413011 Query 16639 CATGGA 16644 |||||| Sbjct 10413012 CATGGA 10413017 Score = 87.8 bits (96), Expect = 3e-13 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 16459 AGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGT 16518 ||| ||||| || || |||||||| || | || ||| | |||| | | ||||| || Sbjct 10416597 AGAGAACATTCAGGGCATCACCAAACCTACGATTCGTAGGTTGGCGAGAAGAGGTGGTGT 10416656 Query 16519 CAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAA 16578 ||| | || ||| ||| |||| ||||||| | | ||| | ||||| ||| | | Sbjct 10416657 TAAGAGAATCAGTGGTTTGATCTACGAAGAGACCAGAGGAGTTCTCAAGATTTTCTTGGA 10416716 Query 16579 GACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTC 16638 || ||| || | |||||| || ||| ||||||||||||| | |||||||| || | Sbjct 10416717 GAACGTGATTCGCGATGCTGTCACCTACACCGAGCACGCTAGGAGGAAGACTGTTACTGC 10416776 Query 16639 CATGGA 16644 |||||| Sbjct 10416777 CATGGA 10416782 Score = 87.8 bits (96), Expect = 3e-13 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 16459 AGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGT 16518 ||| ||||| || || |||||||| || | || ||| | |||| | | ||||| || Sbjct 10418221 AGAGAACATTCAGGGCATCACCAAACCTACGATTCGTAGGTTGGCGAGAAGAGGTGGTGT 10418280 Query 16519 CAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAA 16578 ||| | || ||| ||| |||| ||||||| | | ||| | ||||| ||| | | Sbjct 10418281 TAAGAGAATCAGTGGTTTGATCTACGAAGAGACCAGAGGAGTTCTCAAGATTTTCTTGGA 10418340 Query 16579 GACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTC 16638 || ||| || | |||||| || ||| ||||||||||||| | |||||||| || | Sbjct 10418341 GAACGTGATTCGCGATGCTGTCACCTACACCGAGCACGCTAGGAGGAAGACTGTTACTGC 10418400 Query 16639 CATGGA 16644 |||||| Sbjct 10418401 CATGGA 10418406 >seq4 Length=12502730 Score = 113 bits (124), Expect = 7e-21 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || ||||| || |||||||| ||||| || || || ||| |||| ||| | ||||| Sbjct 5182366 CGCGACAACATTCAGGGAATCACGAAGCCTGCGATTCGGCGTTTGGCGCGTAGGGGTGGC 5182307 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| | || | |||| ||||||| |||| || | |||||||| ||| Sbjct 5182306 GTCAAGCGTATTAGCGGTCTCATCTACGAAGAGACACGTGGCGTGCTCAAGATCTTTCTC 5182247 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| || | ||| || | ||| ||||||||||||| | ||||| || || Sbjct 5182246 GAGAACGTCATTCGTGACGCCGTTACCTACACCGAGCACGCTAGGAGAAAGACCGTTACG 5182187 Query 16637 TCCATGGATATCGTCTATGC 16656 | |||||| |||| ||||| Sbjct 5182186 GCGATGGATGTCGTTTATGC 5182167 >seq293 Length=272044 Score = 111 bits (122), Expect = 2e-20 Identities = 168/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || |||||||| || ||||| ||||| || || || || || ||||| ||||| || ||| Sbjct 66402 GACAACATCCAGGGGATCACGAAGCCCGCGATTCGGCGCCTCGCTCGGCGTGGCGGCGTC 66343 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| || || | |||| || |||| |||| || | ||||||||| | || Sbjct 66342 AAGCGTATCAGCGGTCTCATCTACGAGGAGACACGTGGCGTCCTCAAGATCTTCTTGGAG 66283 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| || | || ||| || ||| |||||||||||| || ||||| || || || Sbjct 66282 AACGTGATTCGCGACGCTGTCACCTACACCGAGCACGCTCGCCGCAAGACCGTAACTGCC 66223 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698 ||||| | || ||||| | || | || ||| | | |||| ||||| || |||| Sbjct 66222 ATGGACGTTGTTTATGCCCTCAAGAGGCAGGGCAGGACCCTTTACGGTTTCGGTGGTTA 66164 >seq11 Length=48970052 Score = 104 bits (114), Expect = 4e-18 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 |||||||| || ||||| || ||||| || || || |||||||| | ||||| || || Sbjct 40257628 GATAACATTCAGGGAATTACGAAGCCCGCGATTCGGCGTCTGGCGAGACGTGGCGGCGTT 40257569 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| || || | |||| || || | ||| | ||| | |||||||||||| | Sbjct 40257568 AAGCGTATCAGCGGTCTCATCTACGAGGAAACTCGCGGAGTTCTCAAGATCTTCCTCGAA 40257509 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| || | || ||| | ||| |||||||||||| || |||||||| || || Sbjct 40257508 AACGTCATTCGCGACGCTGTTACCTACACCGAGCACGCTCGTCGCAAGACTGTTACTGCC 40257449 Query 16640 ATGGA 16644 ||||| Sbjct 40257448 ATGGA 40257444 >seq195 Length=354378 Score = 91.5 bits (100), Expect = 2e-14 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || ||||| || |||||||| ||||| || || || | |||| | | || Sbjct 239205 CTCCGCGACAACATTCAGGGAATCACGAAGCCCGCCATTCGGAGGTTGGCGAGAAGAGGC 239146 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || ||| | || || ||| |||| || |||| ||| | || | ||||||||| Sbjct 239145 GGCGTTAAGAGAATCAGCGGTTTGATCTACGAGGAGACTCGCGGCGTGCTTAAGATCTTC 239086 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| || | || ||| | ||| ||||||||||| | | ||||| ||| Sbjct 239085 CTCGAGAACGTCATTCGCGACGCTGTTACCTACACCGAGCACGCCAGGAGGAAGACCGTC 239026 Query 16634 ACCTCCATGGATATCGTCTATGC 16656 ||| ||||||| |||| || || Sbjct 239025 ACCGCCATGGACGTCGTTTACGC 239003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79041794879448