Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq11 96.9 3e-15 seq848 95.1 1e-14 >seq11 Length=48970052 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA---TCA 26825 ||||| | ||||| ||||| || || || || | |||||| | || | ||| ||| Sbjct 43336507 ATGCAGATCTTTGTGAAAACTTTGACCGGTAAGACCATCACCCTTGAGGTGGAAAGCTCA 43336566 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||||||||||| | || ||| ||||| |||||||| || || ||||| ||| Sbjct 43336567 ---GACACCATCGACAATGTGAAAGCCAAGATCCAGGACAAAGAGGGTATCCCTCCGGAT 43336623 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 ||||| || || |||| | ||||| || ||||| || | |||| | || ||| || Sbjct 43336624 CAACAGAGGCTGATTTTTGCTGGCAAGCAGCTCGAGGACGGGAGAACCCTCGCCGATTAC 43336683 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| || || || || ||||| |||| || Sbjct 43336684 AACATTCAGAAGGAGTCCACCCTCCATTTGGTGCT 43336718 >seq848 Length=99386 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| || || |||| ||||| | |||||| | || | || Sbjct 56538 AATGCAAATATTTGTGAAGACCCTAACCGGAAAGACAATCACCCTTGAGGTGGAGAGCTC 56597 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| || | ||||| |||||| ||||||||||| || || || || || Sbjct 56598 TGACACCATTGACAACGTCAAGGCTAAGATTCAGGACAAAGAAGGCATCCCACCAGACCA 56657 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATA 26946 ||||| ||||||| | || ||||| ||||| |||| | ||| | || ||||||| Sbjct 56658 GCAAAGGCTCATTTTTGCTGGGAAACAGCTCGAGGATGGCCG-AACTTTGGCAGACTATA 56716 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||||| || || ||| | || |||| || Sbjct 56717 ACATTCAAAAGGAGTCCACTCTACACTTGGTTCT 56750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478443794881920