Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq11 116 3e-21 seq706 93.3 4e-14 seq848 91.5 1e-13 seq537 89.7 4e-13 seq2 89.7 4e-13 >seq11 Length=48970052 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| || || || || | || ||| | || || || | Sbjct 43336507 ATGCAGATCTTTGTGAAAACTTTGACCGGTAAGACCATCACCCTTGAGGTGGAAAGCTCA 43336566 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || ||| ||||| |||||||| || || ||||| |||||| Sbjct 43336567 GACACCATCGACAATGTGAAAGCCAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCAA 43336626 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||||| | |||||||| ||||| || | |||| | || |||||| ||| Sbjct 43336627 CAGAGGCTGATTTTTGCTGGCAAGCAGCTCGAGGACGGGAGAACCCTCGCCGATTACAAC 43336686 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || || || | ||||| ||| || | || ||||| || Sbjct 43336687 ATTCAGAAGGAGTCCACCCTCCATTTGGTGCTACGTTTAAGAGGTGG 43336733 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| || || || || | || ||| |||| || || | Sbjct 43328946 ATGCAGATCTTTGTGAAAACTTTGACCGGTAAGACCATCACCCTCGAGGTGGAAAGCTCA 43329005 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || ||| ||||| || || || || || ||||| |||||| Sbjct 43329006 GACACCATAGACAATGTGAAAGCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGATCAA 43329065 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||||| | |||||||| ||||| || | |||| | || |||||| ||| Sbjct 43329066 CAGAGGCTGATTTTTGCTGGCAAGCAGCTCGAGGACGGGAGAACCCTCGCCGATTACAAC 43329125 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || || || | ||||| ||| || | || ||||| || Sbjct 43329126 ATTCAGAAGGAGTCCACCCTCCATTTGGTGCTACGTTTAAGAGGTGG 43329172 >seq706 Length=122390 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || || | || ||||| | || ||| | || || ||| | Sbjct 23018 AATGCAAATTTTTGTTAAGACTCTCACAGGAAAGACCATAACCCTTGAGGTGGAGAGCTC 22959 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| || | || ||| |||||| |||||||| ||||| || || || || Sbjct 22958 TGACACCATAGACAATGTTAAAGCCAAGATTCAAGACAAAGAGGGCATCCCACCAGACCA 22899 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||| || |||| | || || || || || |||| | ||| | | ||||| || Sbjct 22898 ACAGAGGCTCATTTTTGCTGGGAAACAGCTTGAGGATGGCCGAACCTTGGCTGATTACAA 22839 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||||||| || || || |||| || ||| Sbjct 22838 CATTCAAAAGGAGTCCACCCTTCACTTGGTG 22808 >seq848 Length=99386 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || || |||| ||||| | || ||| | || || ||| | Sbjct 56538 AATGCAAATATTTGTGAAGACCCTAACCGGAAAGACAATCACCCTTGAGGTGGAGAGCTC 56597 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| || | ||||| |||||| |||||||||||||| || || || || Sbjct 56598 TGACACCATTGACAACGTCAAGGCTAAGATTCAGGACAAAGAAGGCATCCCACCAGACCA 56657 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168 || || || |||| | || || || ||||| |||| | | ||| | || || |||| Sbjct 56658 GCAAAGGCTCATTTTTGCTGGGAAACAGCTCGAGGATGGCCG-AACTTTGGCAGACTATA 56716 Query 24169 ACATTCAAAAAGAATCTAC 24187 |||||||||| || || || Sbjct 56717 ACATTCAAAAGGAGTCCAC 56735 >seq537 Length=160394 Score = 89.7 bits (98), Expect = 4e-13 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 ||||| ||||| || ||||| || || ||||| |||||| || || ||||| || ||| Sbjct 154869 GACAAGGAAGGTATCCCTCCTGACCAGCAGAGGTTGATTTTCGCTGGTAAGCAGCTGGAA 154810 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| | | | ||||||||||| ||||| ||||| ||| ||||||| ||||| Sbjct 154809 GATGGTCGCACTCTTGCTGATTATAACATACAAAAGGAATCAACACTTCATTTGGTGTTG 154750 Query 24204 AGATTGAGAGGAGGACTATAATGATT 24229 || | || |||||| | ||||||| Sbjct 154749 AGGCTCAGGGGAGGA--ACAATGATT 154726 >seq2 Length=36921656 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| |||| ||||| | | Sbjct 32545436 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACAATCACCCTCGAGGTCGAAAGCTCC 32545377 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || ||| ||||| ||||| ||||| || || || || || Sbjct 32545376 GACACCATCGACAACGTGAAAACTAAGATCCAGGACAAGGAAGGAATCCCCCCAGACCAG 32545317 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | || ||||||||| ||||| || | | | | | || || |||||| Sbjct 32545316 CAGAGGTTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCTGACTATAAC 32545257 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || || || || || || |||| || ||||| Sbjct 32545256 ATCCAGAAGGAGTCAACTCTTCACTTGGTGTT 32545225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429744557023080