Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq848 104 2e-17 seq706 100 2e-16 seq11 98.7 8e-16 >seq848 Length=99386 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| ||||| || || || || ||||| || || ||| | || |||| | Sbjct 56538 AATGCAAATATTTGTGAAGACCCTAACCGGAAAGACAATCACCCTTGAGGTGGAGAGCTC 56597 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 ||||| ||| |||| || || || ||| || ||||||||| |||| || | Sbjct 56598 TGACACCATTG-ACAACGTCAAGGCTAAGATTCAGGACAAAGAAGGCATCCCACCAGACC 56656 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||||| || |||| ||| || ||||| | || |||| | ||| |||| || |||| Sbjct 56657 AGCAAAGGCTCATTTTTGCTGGGAAACAGCTCGAGGATGGCCGAACTTTGGCAGACTATA 56716 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGT 115494 |||||||||| ||||| ||| |||| |||| Sbjct 56717 ACATTCAAAAGGAGTCCACTCTACACTTGGT 56747 >seq706 Length=122390 Score = 100 bits (110), Expect = 2e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || || ||||| ||||| ||||| ||| | || |||| | Sbjct 23018 AATGCAAATTTTTGTTAAGACTCTCACAGGAAAGACCATAACCCTTGAGGTGGAGAGCTC 22959 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 ||||| | | |||| || ||| || ||| || ||||| ||| |||| || | Sbjct 22958 TGACACCATAG-ACAATGTTAAAGCCAAGATTCAAGACAAAGAGGGCATCCCACCAGACC 22900 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | || || || |||| ||| || ||||| | || |||| | |||| |||| ||||| | Sbjct 22899 AACAGAGGCTCATTTTTGCTGGGAAACAGCTTGAGGATGGCCGAACCTTGGCTGATTACA 22840 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTG 115495 |||||||||| ||||| || | || ||||| Sbjct 22839 ACATTCAAAAGGAGTCCACCCTTCACTTGGTG 22808 >seq11 Length=48970052 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCCA 115343 ||||||||||| |||||||| | ||||||||||| || ||| | || |||| | || Sbjct 43336735 ATGCAAATTTTCGTCAAAACTTTGACGGGAAAAACTATCACCTTGGAGGTGGAGAGTTCA 43336794 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | | || ||| | |||||| || ||| || || || || |||| || | Sbjct 43336795 G--ATACCATTGATAATGTAAAAGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACC 43336852 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| |||||||| | ||| || ||||| | ||||||| | |||| | || ||||||| Sbjct 43336853 AGCAGAGACTTATCTTTGCTGGAAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATA 43336912 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| || || ||||| || | || |||||||| Sbjct 43336913 ACATCCAGAAGGAGTCCACCCTGCACTTGGTGTTG 43336947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425154601760320