Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq11 120 3e-22 seq706 104 2e-17 seq848 95.1 1e-14 seq8 82.4 6e-11 >seq11 Length=48970052 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || |||||||| ||||| | || || ||||| || ||||||||||| Sbjct 43329631 ATGCCACCACGAAGCCTCAAAACCAAATGCAGAGTGGACTCTTTCTGGATGTTGTAATCC 43329572 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | |||||| |||||||||||||| |||| || | ||| ||||| || Sbjct 43329571 GCAAGGGTTCTTCCATCTTCGAGTTGTTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGT 43329512 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| |||||| ||| | | |||| ||| || | ||| Sbjct 43329511 GGAATACCCTCCTTGTCCTGAATCTTGGCTTTCACGTTATCAATGGTATCTGAACTTTCA 43329452 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | || || || |||| ||| || ||||||||||||||| Sbjct 43329451 ACCTCCAAAGTTATGGTCTTTCCCGTCAAAGTCTTCACAAAAATCTGCATG 43329401 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | ||| | ||||| || || ||||| ||||| |||||||| | Sbjct 43330084 CCACCACGAAGACGAAGAACAAGATGTAAGGTGGACTCTTTCTGAATATTGTAATCAGCC 43330025 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| |||||| | ||| || ||||| | || || | ||| |||||||| ||| Sbjct 43330024 AAGGTACGACCATCTTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGGGGA 43329965 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTA-GCTGTTCAACGGTGTCGGTGGATTCGAC 114334 |||||||| ||||| ||||||| || | ||| |||| || || | | ||| || Sbjct 43329964 ATGCCTTCCTTGTCCTGAATCTTTGCCTTCACACTG-TCAATAGTATCAGAGCTTTCCAC 43329906 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| ||| | || || || || | |||||| ||||| || ||||| Sbjct 43329905 CTCCAAGGTAATGGTCTTCCCTGTTAAAGTTTTCACAAATATTTGCAT 43329858 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | ||| || ||||||| || ||||| || || || |||||||| Sbjct 43337420 ATACCACCACGAAGGCGCAACACCAAATGTAGAGTGGATTCCTTCTGGATATTGTAATCA 43337361 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| |||||| || || || ||||| |||| || | ||| ||||| || Sbjct 43337360 GCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGT 43337301 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || || || |||||| || | | |||| || || | ||| Sbjct 43337300 GGAATGCCCTCCTTATCCTGAATCTTAGCCTTCACATTGTCAATAGTATCAGAACTTTCA 43337241 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | || || || |||| ||| || ||||||||||||||| Sbjct 43337240 ACCTCCAAAGTTATGGTCTTCCCTGTCAAAGTCTTCACAAAAATCTGCATG 43337190 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | || | ||||| || ||||| || ||||| || || || | Sbjct 43337645 CCACCACGAAGGCGAAGCACAAGATGTAAAGTGGATTCCTTCTGAATATTATAGTCCGCC 43337586 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| |||||| | ||| || ||||| | || || | ||| || || || ||| Sbjct 43337585 AAGGTACGACCATCTTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGA 43337526 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || ||||| ||||||| ||| | | |||| || || | | ||| || Sbjct 43337525 ATGCCCTCCTTGTCCTGAATCTTTGCTTTAACATTGTCAATAGTATCAGAGCTTTCCACC 43337466 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| ||| | || || || ||||||||||| ||||| || ||||| Sbjct 43337465 TCCAAGGTAATGGTCTTCCCTGTCAGAGTTTTCACAAATATTTGCAT 43337419 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| |||| ||| || ||||| | || || || || || ||||||||||| Sbjct 43337192 ATGCCACCACGAAGTCGCAACACCAAATGCAGAGTGGACTCCTTCTGGATGTTGTAATCC 43337133 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| ||||| ||||| || || |||| || | ||| ||||| || Sbjct 43337132 GCAAGGGTACGCCCATCCTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGC 43337073 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| |||||| ||| | | |||| || || | ||| Sbjct 43337072 GGGATACCCTCCTTGTCTTGAATCTTGGTTTTCACATTATCAATAGTATCTGAACTTTCA 43337013 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | || || || |||| || || ||||||||||||||| Sbjct 43337012 ACCTCCAAAGTTATGGTCTTTCCAGTCAAGGTCTTCACAAAAATCTGCATG 43336962 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || || ||||||||||||||| | || | || || Sbjct 43336715 ACCAAATGGAGGGTGGACTCCTTCTGAATGTTGTAATCGGCGAGGGTTCTCCCGTCCTCG 43336656 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || || ||||| | || || | |||||| |||||||| || || |||||||| Sbjct 43336655 AGCTGCTTGCCAGCAAAAATCAGCCTCTGTTGATCCGGAGGGATACCCTCTTTGTCCTGG 43336596 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| ||| | | || | |||||| | | ||| || || | ||| | || || Sbjct 43336595 ATCTTGGCTTTCACATTGTCGATGGTGTCTGAGCTTTCCACCTCAAGGGTGATGGTCTTA 43336536 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||||| |||||| ||||| |||||||| Sbjct 43336535 CCGGTCAAAGTTTTCACAAAGATCTGCAT 43336507 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | |||||| || || | || || || || || ||||||||||| Sbjct 43329403 ATGCCACCACGAAGCCGCAAAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCC 43329344 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | |||||| || ||||| ||||| |||| || | ||| ||||| || Sbjct 43329343 GCAAGGGTTCTTCCATCTTCCAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGT 43329284 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| |||||| ||| | | |||| || || | ||| Sbjct 43329283 GGGATACCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATCGTATCTGAACTTTCA 43329224 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| | || || || |||| |||||| || ||||| |||||| Sbjct 43329223 ACCTCCAAGGTGATAGTCTTTCCCGTCAAAGTTTTGACGAAAATTTGCATG 43329173 >seq706 Length=122390 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | || || || ||||||||||||||||| Sbjct 22788 ATACCACCGCGAAGACGGAGCACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAATCA 22847 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||| ||||| ||||| ||||| | ||||| | ||||||||| || Sbjct 22848 GCCAAGGTTCGGCCATCCTCAAGCTGTTTCCCAGCAAAAATGAGCCTCTGTTGGTCTGGT 22907 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| |||||||| |||||| ||| | | || | |||||| | | || Sbjct 22908 GGGATGCCCTCTTTGTCTTGAATCTTGGCTTTAACATTGTCTATGGTGTCAGAGCTCTCC 22967 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || || ||||| || |||||||| ||||| Sbjct 22968 ACCTCAAGGGTTATGGTCTTTCCTGTGAGAGTCTTAACAAAAATTTGCAT 23017 >seq848 Length=99386 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| || |||| || || || ||||||||||| || || Sbjct 56768 ATGCCACCACGGAGACGGAGAACCAAGTGTAGAGTGGACTCCTTTTGAATGTTATAGTCT 56709 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| || ||| || || ||||| ||||| | ||||| | || ||||| || Sbjct 56708 GCCAAAGTTCGGCCATCCTCGAGCTGTTTCCCAGCAAAAATGAGCCTTTGCTGGTCTGGT 56649 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||||||||| |||||| || | | |||| |||||| | | || Sbjct 56648 GGGATGCCTTCTTTGTCCTGAATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCC 56589 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || ||||| || || || ||||| || ||||| Sbjct 56588 ACCTCAAGGGTGATTGTCTTTCCGGTTAGGGTCTTCACAAATATTTGCAT 56539 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| |||| ||| || | || | || |||||||| ||||||||||| || Sbjct 57224 ATACCACCACGGAGTCGCAAGACAAGGTGGAGTGTTGATTCTTTCTGAATGTTGTAGTCA 57165 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | ||| || | ||| || ||||| | || | | ||| ||||| || Sbjct 57164 GCAAGAGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGT 57105 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGT-TTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 || || || || ||||| ||| |||||| || | | || | |||||| | ||| Sbjct 57104 GGGATCCCCTCCTTGTCCTGAAT-TTTTGTCTTCACATTATCGATGGTGTCTGAACTTTC 57046 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || || || |||| ||| |||||||| |||||||| Sbjct 57045 AACCTCCAGGGTAATAGTCTTTCCAGTCAAAGTCTTTACAAAGATCTGCAT 56995 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/233 (69%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 |||| || ||||| || | ||| || | || | ||||| ||||| ||||||||||||| Sbjct 64298 AAAT-CCACCACGAAGACGCAAGACAAGGTGAAGAGTAGACTCTTTCTGAATGTTGTAAT 64240 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 | | ||| | ||| || | ||| || ||||| |||| | | |||||||| | Sbjct 64239 CAGCAAGAGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTTTGTTGGTCTG 64180 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330 | ||||| || || ||||| || ||| ||| | | |||| ||||| | || Sbjct 64179 GTGGAATTCCCTCCTTGTCTTGGATTTTTGCTTTGACATTGTCAATAGTGTCTGAACTTT 64120 Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 | || |||| ||| | || || || |||| ||| || ||||| ||||||||| Sbjct 64119 CAACCTCCAAGGTAATAGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCATG 64067 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || || || | ||| || || ||||| |||||||||||| Sbjct 56540 ATTCCACCACGGAGACGGAGCACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAATCG 56481 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| ||||| || || ||||| |||||||||| || ||||| || Sbjct 56480 GCGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCGGGT 56421 Query 114273 GGAATGCCTTCTTTGTC 114289 || |||||||| ||||| Sbjct 56420 GGGATGCCTTCCTTGTC 56404 >seq8 Length=20383548 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| ||| | || || || || || || || || Sbjct 13445048 CGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGCTTTCC 13445107 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| | ||||| ||||| ||||| || ||||| || || ||||| ||||| || Sbjct 13445108 GGCGAATATGAGGCGCTGCTGGTCGGGCGGAATCCCCTCCTTGTCCTGGATCTTGGCCTT 13445167 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | |||||| | || || || |||| ||| | |||||| || || || || Sbjct 13445168 GACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGGGTTATCGTTTTACCCGTTAGGGT 13445227 Query 114365 TTTTACAAAAATCTGCAT 114382 ||| || ||||||||||| Sbjct 13445228 TTTCACGAAAATCTGCAT 13445245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419947321504032