Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 260 3e-64 >seq2 Length=36921656 Score = 260 bits (288), Expect = 3e-64 Identities = 447/645 (69%), Gaps = 8/645 (1%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||||||||| || | ||| |||||| || |||||| | ||||| Sbjct 1442223 ATCTGGGAAATGTACAAGAAAGCCGAAGCCTCTTTCTGGACGGCGGAGGAGGTCGACCTC 1442282 Query 42360 GCCAAGGACA-CGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAA 42418 | ||||| | ||| |||||| || || | || |||| ||| ||| | Sbjct 1442283 TCGCAGGACCTCCGCCA-CTGGGACTCCCTCACCGACGGCGAACGCCACTTCGTCACCCA 1442341 Query 42419 CATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTT 42478 | | || |||||||| |||||||| |||||||| ||| ||||| || ||| | | || Sbjct 1442342 CGTCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGTCCTCGAGAATCTCGCCGGCCGCTT 1442401 Query 42479 CATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGA 42538 |||||| ||| | || | ||||| ||| ||||||||||||||| || ||||| || Sbjct 1442402 CATGAAGGAGATCCAAGTCGCCGAGGCTCGCGCCTTCTACGGCTTCCAAATCGCCATCGA 1442461 Query 42539 GAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGA 42598 |||| | ||||| ||| ||||| | || ||| | || |||||| | ||| ||| Sbjct 1442462 GAACATCCACTCCGAGATGTACAGCCTCCTCCTCGAAACCTACATCAAGAGCTCCGACGA 1442521 Query 42599 GCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTG 42658 | || || ||| | ||||| || || || |||||| | |||||||| | || Sbjct 1442522 GAAGCACCACCTCTTCCACGCCATCGAAACCATCCCCTGCGTTGCCAAGAAGGCCCAATG 1442581 Query 42659 GGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTAC 42718 ||| || ||||||||| ||||| | |||| ||| | | || ||||| | Sbjct 1442582 GGCCCTGCGCTGGATCGACTCCTCCGAC---TCCTTCGCTGAGCGCATCGTCGCCTTCGC 1442638 Query 42719 CGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA 42778 | ||||||||| ||||||||||| || |||| |||||| |||||||||||| || Sbjct 1442639 CTGCGTCGAGGGAATCTTCTTCTCTGGAAGCTTCTGCTCCATTTTCTGGCTCAAGAAGCG 1442698 Query 42779 GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCA 42838 | | |||||| || ||||| ||||| ||||||||||| | | ||||||||||| || Sbjct 1442699 CGGCTTGATGCCTGGCCTCACTTTCTCCAACGAACTCATTTCCCGCGACGAGGGGCTTCA 1442758 Query 42839 TAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCG 42898 | ||||| ||||||||| ||| ||| | || ||| | |||| | ||||||| Sbjct 1442759 CTGCGACTTCGCCTGCCTCTTGTACTC---TCTGCTGAGGAAGAAGCTCAGCGAGGAGCG 1442815 Query 42899 GGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTT 42943 || || ||| | | ||| || ||||| ||||||| |||||| Sbjct 1442816 CGTGAAGGAGATCGTGAGGGACGCTGTGGATATCGAGAGGGAGTT 1442860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943907920287360