Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq11 91.5 1e-13 >seq11 Length=48970052 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || ||||| | || ||||||| ||| || ||| ||||||||||||||||||||| || Sbjct 43336733 CCACCTCTTAAACGTAGCACCAAATGGAGGGTGGACTCCTTCTGAATGTTGTAATCGGCG 43336674 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | |||| || | |||||||| ||||| ||||| | ||| |||||| || Sbjct 43336673 AGGGTTCTCCCGTCCTCGAGCTGCTTGCCAGCAAAAATCAGCCTCTGTTGATCCGGAGGG 43336614 Query 34021 ACGCTCTCTTTGTCC 34035 | | |||||||||| Sbjct 43336613 ATACCCTCTTTGTCC 43336599 Score = 87.8 bits (96), Expect = 1e-12 Identities = 155/227 (68%), Gaps = 18/227 (8%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || || || ||||| | ||| ||| |||||||| |||||||| ||||| || Sbjct 43330075 AGACGAAGAACAAGATGTAAGGTGGACTCTTTCTGAATATTGTAATCAGCCAAGGTACGA 43330016 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || ||||||||||| || ||||| || || | |||||| ||| || | || || Sbjct 43330015 CCATCTTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGGGGAATGCCTTCC 43329956 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTC---GCATTCGACC 34086 |||||| ||| ||| || ||||||| ||| ||| || || ||| ||| Sbjct 43329955 TTGTCCTGAATCTTTGCCT---------TCACACTGTCAATAGTATCAGAGCTTTCCACC 43329905 Query 34087 ------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || || || || || |||| ||||||||||| |||||||| Sbjct 43329904 TCCAAGGTAATGGTCTTCCCTGTTAAAGTTTTCACAAATATTTGCAT 43329858 Score = 86.0 bits (94), Expect = 5e-12 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || ||||| ||||| | ||| ||||||||||| || || || ||||| || Sbjct 43337636 AGGCGAAGCACAAGATGTAAAGTGGATTCCTTCTGAATATTATAGTCCGCCAAGGTACGA 43337577 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || ||||||||||| || ||||| || || | ||||||||| || | || ||| Sbjct 43337576 CCATCTTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCC 43337517 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCA-TTCGACCG 34087 |||||| | | | ||||||| | || | | |||||| || || || || | | Sbjct 43337516 TTGTCC-TGAATCTTTGCTTTAACATTGTCAATAGTATCAG-AGCTTTCCACCTCCAAGG 43337459 Query 34088 TTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | || || || || || || ||||||||||| |||||||| Sbjct 43337458 TAATGGTCTTCCCTGTCAGAGTTTTCACAAATATTTGCAT 43337419 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || ||||| | || ||||||| ||| || ||| ||||||||||||||||||||| || Sbjct 43329172 CCACCTCTTAAACGTAGCACCAAATGGAGGGTGGACTCCTTCTGAATGTTGTAATCGGCG 43329113 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 | || | |||| || | |||||||| ||||| ||||| | ||| |||||| Sbjct 43329112 AGGGTTCTCCCGTCCTCGAGCTGCTTGCCAGCAAAAATCAGCCTCTGTTGATCC 43329059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396885595061872