Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2 140 8e-28 seq706 120 7e-22 seq848 116 9e-21 seq11 111 4e-19 seq6 111 4e-19 seq8 109 1e-18 >seq2 Length=36921656 Score = 140 bits (154), Expect = 8e-28 Identities = 176/238 (74%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | || ||||| |||| || ||| || ||||| || |||| Sbjct 32545434 CATG-CCACCACGGAGACGGAGGACGAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGT 32545492 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | ||||| ||||||||||| || | || ||||| |||||||| ||||| || || | Sbjct 32545493 CAGCGAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGCTG---GT 32545549 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 | ||| |||||||| || |||||||| || || || ||||| || || | || || Sbjct 32545550 CCGGGGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGC 32545609 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| || ||||| ||||| ||||| ||||| || ||||| ||||| || ||||| Sbjct 32545610 T---TTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACGAAGATTTGCAT 32545664 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||| ||||| ||||| ||||| || | || || || |||||| Sbjct 32545246 TCCTTCTGGATGTTATAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 32545305 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | ||| || |||||| |||||||| || |||||||| || | ||||||| Sbjct 32545306 ATCAACCTCTGCTGG---TCTGGGGGGATTCCTTCCTTGTCCTGGATCTTAGTTTTCACG 32545362 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| ||| || ||||| ||||| ||||| || || || ||||| Sbjct 32545363 TTGTCGATGGTGTCGGAGCTTTCGACCTCGAGGGTGATTGTCTTGCCAGTGAGGGTCTTA 32545422 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 32545423 ACGAAGATCTGCAT 32545436 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/216 (70%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || || |||| ||| || || || ||||| |||||||| || || | || || Sbjct 32544541 AGGACAAGGTGAAGGGTGGACTCCTTCTGAATATTGTAGTCGGCAAGGGTCCTCCCATCC 32544600 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || ||||| ||||||| | ||| || |||||| ||||| || ||| Sbjct 32544601 TCCAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATGCCTTCCTTGTCC 32544660 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATC 288438 ||||||||||| ||||| || || || | || |||| || || || | || || Sbjct 32544661 TGGATTTTCGCCTTCACATTGTCAATGGTGTCCGAGCTC---TCCACCTCCAAGGTAATG 32544717 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || || ||||| || ||||| ||||||||| Sbjct 32544718 GTCTTACCCGTGAGAGTTTTAACGAAAATCTGCATT 32544753 >seq706 Length=122390 Score = 120 bits (132), Expect = 7e-22 Identities = 166/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| | || || | || | ||| ||| |||||||| || || ||||| Sbjct 23018 TCCACCGCGGAGACGGAGCACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAATCGGC 23077 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || || || | || || || || || || |||||||| || ||| Sbjct 23078 AAGGGTTCGCCCATCCTCAAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGTGG 23137 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422 ||| ||||| || || || || || || |||||||| ||||| | |||| ||| || Sbjct 23138 GATCCCTTCCTTGTCTTGAATCTTGGCCTTCACGTTATCTATGGTATCGGAACTC---TC 23194 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| || ||||| ||||| || || || ||||| Sbjct 23195 CACTTCGAGAGTGATGGTCTTACCAGTCAGGGTCTTAACAAAGATTTGCAT 23245 >seq848 Length=99386 Score = 116 bits (128), Expect = 9e-21 Identities = 165/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | || || | || | |||| || |||||||| || || ||||| Sbjct 56538 TCCACCACGGAGACGGAGCACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAATCGGC 56479 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || || || || | || || || || ||||| ||||| || || ||| Sbjct 56478 GAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCGGGTGG 56419 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422 ||| ||||| || || || ||||| || || || || ||||| | ||| ||| || Sbjct 56418 GATGCCTTCCTTGTCTTGAATTTTGGCCTTAACATTGTCTATGGTATCTGAACTC---TC 56362 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||| ||||| || || ||||| || ||||| ||||| || ||||| Sbjct 56361 TACTTCGAGAGTGATGGTTTTACCGGTGAGGGTCTTAACGAAGATTTGCAT 56311 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | | || || |||| || ||||| || || || || || || Sbjct 57677 CCACCGCGAAGACGCAAAACAAGGTGAAGAGTAGACTCTTTCTGAATGTTGTAATCAGCA 57618 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || |||||||| || || || ||||||| | ||| || |||| Sbjct 57617 AGAGTCCTTCCATCCTCTAATTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGG 57558 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || || |||||||| ||||| || || || || | || ||| || Sbjct 57557 ATTCCCTCCTTGTCTTGGATTTTGGCTTTGACATTATCAATCGTGTCTGAACTTTCAACC 57498 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || ||||| || |||| ||||||||| ||||||||||| Sbjct 57497 TCCAAGGTAATAGTCTTTCCAGTCAAAGTCTTGACAAATATCTGCAT 57451 >seq11 Length=48970052 Score = 111 bits (122), Expect = 4e-19 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | ||| || ||||| | ||| ||| || || ||||||||||| || Sbjct 43337646 TCCACCACGAAGGCGAAGCACAAGATGTAAAGTGGATTCCTTCTGAATATTATAGTCCGC 43337587 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || || ||||| ||||| || || || || || || | ||| ||| ||| Sbjct 43337586 CAAGGTACGACCATCTTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGG 43337527 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 || || || || ||||| || || ||||| || || || |||| ||| ||| ||| Sbjct 43337526 AATGCCCTCCTTGTCCTGAATCTTTGCTTTAACATTGTCAATAGTATCAGAGCT---TTC 43337470 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || || |||||||| |||||||| || || ||||| ||||| Sbjct 43337469 CACCTCCAAGGTAATGGTCTTCCCTGTCAGAGTTTTCACAAATATTTGCAT 43337419 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || || |||||||| || | ||||| || | || || || || || Sbjct 43329136 TCCTTCTGAATGTTGTAATCGGCGAGGGTTCTCCCGTCCTCGAGCTGCTTGCCAGCAAAA 43329077 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||||||| ||||| || || ||||||||||| || |||||||| || Sbjct 43329076 ATCAGCCTCTGTTGATCCGGAGGGATACCCTCCTTATCCTGGATCTTGGCTTTCACATTG 43329017 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| | || ||| ||| || ||||| ||||| ||||| ||||||| ||| || Sbjct 43329016 TCTATGGTGTCTGAGCT---TTCCACCTCGAGGGTGATGGTCTTACCGGTCAAAGTTTTC 43328960 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 43328959 ACAAAGATCTGCAT 43328946 Score = 104 bits (114), Expect = 6e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || |||||||| ||||| || || || || || ||||| | || || || || || Sbjct 43329821 TTCCTTCTGGATATTGTAGTCAGCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAA 43329762 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | ||| ||| ||| || ||||| |||||||| || || || ||||| || Sbjct 43329761 GATAAGCCTCTGCTGATCCGGTGGAATACCTTCCTTATCCTGAATCTTAGCCTTCACATT 43329702 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||||||| || ||| || || | || || ||||| || ||||||||||| || Sbjct 43329701 ATCTATAGTGTCAGAACTTTCAACCTCCAAAGTAATGGTCTTTCCCGTCAGAGTCTTCAC 43329642 Query 288462 GAATATCTGCAT 288473 ||||| ||||| Sbjct 43329641 AAATATTTGCAT 43329630 Score = 95.1 bits (104), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || || | || | ||| | ||| ||||| ||||| || || | Sbjct 43329632 CATG-CCACCACGAAGCCTCAAAACCAAATGCAGAGTGGACTCTTTCTGGATGTTGTAAT 43329574 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || | ||| ||||| | |||||| || || ||||| || | ||| || Sbjct 43329573 CCGCAAGGGTTCTTCCATCTTCGAGTTGTTTACCAGCAAAGATAAGCCTCTGCTGGTCTG 43329514 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||| || || || || ||||| || || ||||||||||| || || | ||| || Sbjct 43329513 GTGGAATACCCTCCTTGTCCTGAATCTTGGCTTTCACGTTATCAATGGTATCTGAACTTT 43329454 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || | || || ||||| || |||| |||||| || || |||||||| Sbjct 43329453 CAACCTCCAAAGTTATGGTCTTTCCCGTCAAAGTCTTCACAAAAATCTGCAT 43329402 >seq6 Length=23791330 Score = 111 bits (122), Expect = 4e-19 Identities = 167/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | || || || || | || || || ||||| || |||| Sbjct 23717760 CATG-CCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGT 23717818 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||||||| || || || || || | || || || |||||||||||||| || || Sbjct 23717819 CGGCGAGGGTCCGCCCATCCTCGAGCTGCTTCCCGGCGAAGATCAGACGTTGCTGGTCTG 23717878 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA-- 288419 |||||| ||||| || ||||| || || || ||||| || || || | || ||| Sbjct 23717879 GTGGGATCCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTC---CGAAC 23717935 Query 288420 -TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| |||||||||||||| ||||| || ||||| Sbjct 23717936 TCTCCACCTCCAGAGTTATGGTCTTACCGGTCAGAGTCTTAACGAAGATTTGCAT 23717990 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| || | ||| || || ||||| || ||||||||| Sbjct 10734082 CCGCCGCGGAGGCGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCG 10734023 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || ||||| |||||||| || ||||| || || Sbjct 10734022 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGA 10733963 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || || ||||| || || | || || || || Sbjct 10733962 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACC 10733903 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || ||||| || || || || || || ||||| |||||||| Sbjct 10733902 TCCAAGGTTATCGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 10733856 Score = 102 bits (112), Expect = 2e-16 Identities = 165/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | ||| | || || || |||| || || || ||||| || |||| Sbjct 23717532 CATG-CCACCCCTGAGACGCAGAACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGT 23717590 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | ||||| |||||||| || || | |||||||| || || |||| | || || | Sbjct 23717591 CAGCGAGGGTGCGTCCATCCTCAAGCTGTTTTCCAGCAAAAATCAACCTTTGCTGG---T 23717647 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| || || || || ||||| || || | || ||||| || || | ||| Sbjct 23717648 CTGGGGGGATCCCCTCCTTGTCCTGAATCTTGGACTTTACGTTGTCGATGGTGTCGGAGC 23717707 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || ||||| ||||| ||||| || || ||||||||||||||||| Sbjct 23717708 TTTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGGGTTTTGACGAATATCTGCAT 23717762 >seq8 Length=20383548 Score = 109 bits (120), Expect = 1e-18 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| || | ||| || || ||||| || ||||||||| Sbjct 13445019 CCGCCGCGGAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 13445078 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || ||||| ||||| || || ||||| || || Sbjct 13445079 AGGGTGCGGCCGTCCTCCAGCTGCTTTCCGGCGAATATGAGGCGCTGCTGGTCGGGCGGA 13445138 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || || ||||| || || | || || || || Sbjct 13445139 ATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACC 13445198 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479 || || || ||||| || || || || || || ||||| |||||||| |||| Sbjct 13445199 TCCAGGGTTATCGTTTTACCCGTTAGGGTTTTCACGAAAATCTGCATCGTGTT 13445251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179102183131408