Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2 159 8e-34 >seq2 Length=36921656 Score = 159 bits (176), Expect = 8e-34 Identities = 358/533 (67%), Gaps = 6/533 (1%) Strand=Plus/Plus Query 243208 CTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAG 243267 || ||| |||||||||||| ||| || ||| || ||||| ||||||| | | Sbjct 1442532 CTCTTCCACGCCATCGAAACCATCCCCTGCGTTGCCAAGAAGGCCCAATGGGCCCTGCGC 1442591 Query 243268 TGGCTAGAACCCGGTAAATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGT 243327 ||| | || || | || || |||||||| ||||||||| | ||||| || || Sbjct 1442592 TGGATCGACTCCTCCGACTCCTTCGCTGAGCGCATCGTCGCCTTCGCCTGCGTCGAGGGA 1442651 Query 243328 ATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCT 243387 || | || || || || |||||| |||| || ||||| ||| || |||||||| Sbjct 1442652 ATCTTCTTCTCTGGAAGCTTCTGCTCCATTTTCTGGCTCAAGAAGCGCGGCTTGATGCCT 1442711 Query 243388 GGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGT 243447 |||||| | | || ||||| |||| ||||||||||| |||||| | |||| Sbjct 1442712 GGCCTCACTTTCTCCAACGAACTCATTTCCCGCGACGAGGGGCTTCACTGCGACTTCGCC 1442771 Query 243448 GAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGA--AACG-GTCAAACAAATC 243504 || |||| || ||| ||| ||||| || ||| | || || || | ||| Sbjct 1442772 TGCCTCTTGTACTCTCTGCTGAGGAAGAAGCT--CA-GCGAGGAGCGCGTGAAGGAGATC 1442828 Query 243505 ATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTT 243564 | | || || || || | ||| | ||| || | |||||||| |||| ||| | | Sbjct 1442829 GTGAGGGACGCTGTGGATATCGAGAGGGAGTTTGTGTGCGACGCGCTTCCGTGCGCGTTG 1442888 Query 243565 ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTC 243624 | || ||||| || | ||||| |||||||| || || || || || || | || Sbjct 1442889 CTGGGGATGAATGGGGAGTTGATGGGTCAGTACATTGAGTTTGTGGCGGATCGTTTGTTG 1442948 Query 243625 ATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTC 243684 | |||||||| | | ||| |||||||| ||||||| |||| || |||||||| Sbjct 1442949 GTTGCGCTTGGCTGCGGGAAGGTGTACAATGTTCAGAACCCTTTTGACTGGATGGAGCTG 1443008 Query 243685 ATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 |||||| | || ||||| || || ||||| || ||||| || | || ||||| Sbjct 1443009 ATTTCGTTGCAGGGGAAGACCAATTTCTTTGAGAAGCGCGTGGGGGAGTATCA 1443061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102363722571600