Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2 145 1e-29 >seq2 Length=36921656 Score = 145 bits (160), Expect = 1e-29 Identities = 346/517 (67%), Gaps = 16/517 (3%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 |||||| || || |||||||| |||| || || || ||||| | | || ||||| Sbjct 1443044 CTTCTCAAAGAAATTGGTCTTCCCCTGCAACGAAATCAGCTCCATCCAGTCAAAAGGGTT 1442985 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 || || | || |||| | || || || ||| ||| | || |||||||| || Sbjct 1442984 CTGAACATTGTACACCTTCCCGCAGCCAAGCGCAACCAACAAACGATCCGCCACAAACTC 1442925 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGC-CTAACGGGGAGCGCTTCCG 159827 ||||| || |||| ||| | || |||||||||| | | |||| ||||| || Sbjct 1442924 AATGTACTGACCCATCAACTCCCCATTCATCCCCAGCAACGCGCACGGA-AGCGCGTCGC 1442866 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACC 159887 ||| ||||||| |||| || || || || || |||| |||| | || || || | | Sbjct 1442865 ACACAAACTCCCTCTCGATATCCACAGCGTCCCTCACGATCTCCTTCACGCGCTCCTCGC 1442806 Query 159888 CCGGCTTG---CCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944 |||| | || | || ||| |||||| || ||||||||||| || | Sbjct 1442805 TGAGCTTCTTCCTCAGCAGAGAGT------ACAAGAGGCAGGCGAAGTCGCAGTGAAGCC 1442752 Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004 ||||||| || || |||| |||||||| | ||||||| ||||| | || ||| | Sbjct 1442751 CCTCGTCGCGGGAAATGAGTTCGTTGGAGAAAGTGAGGCCAGGCATCAAGCCGCGCTTCT 1442692 Query 160005 TGAGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 ||||||| ||||||| ||| |||| || || ||||| ||||| ||| || || Sbjct 1442691 TGAGCCAGAAAATGG-AGCAGAAGCTTCCAGAGAAGAAGATTCCCTCGACGCAGGCGAAG 1442633 Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123 || |||| | |||| | || ||| || || ||| | |||| | |||||||| Sbjct 1442632 GCGACGATGCGCTCAGCGAAGGAGTCGGAGGAGTC---GATCCAGCGCAGGGCCCATTGG 1442576 Query 160124 GCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGT 160160 |||||||| || | ||| || ||| |||| ||||| Sbjct 1442575 GCCTTCTTGGCAACGCAGGGGATGGTTTCGATGGCGT 1442539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794792052620160