Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq59 125 9e-24 seq2 122 1e-22 seq8 120 4e-22 seq7 111 2e-19 >seq59 Length=585201 Score = 125 bits (138), Expect = 9e-24 Identities = 250/366 (68%), Gaps = 6/366 (2%) Strand=Plus/Plus Query 15887 ATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGC 15946 |||||| || ||||| | | || || |||||| || ||| | | || ||||| || Sbjct 286596 ATCAAACCGGCCTGGTCTCAATAGGGCAGAATCAAGAATGTCAGCCCTGTTGGTTGCTGC 286655 Query 15947 GATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAAT 16006 ||||||| ||||| || | ||||| |||||||| ||||||||||| ||||| | Sbjct 286656 AATGACAATGATACCAGTATTACCCTCAAACCCATCCATTTCTGTCAAAAGTTGGTTGAG 286715 Query 16007 AGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGC 16066 || ||||| | |||||||||| | | ||||| | | ||| |||| || || Sbjct 286716 GGTCTGTTCTCTTTCATCATTCCCACCACCAATACCAGTCCCTCTTTGTCTTCCAACAGC 286775 Query 16067 ATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTC--AAAGAGA 16124 |||||| ||||||| ||||| ||||| || ||| || || |||| || | | Sbjct 286776 ATCAATTTCATCAACAAAGACAATGCAAGGGGCATTCTCTTTGGC--CTTCTTGAACAAA 286833 Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 16184 || || || || || || ||||||||||||||||| ||||| | | | | | || Sbjct 286834 TCACGGACTCGAGAAGCACCAACACCAACAAACATCTCAACAAACTCAGAACCTG-ATAT 286892 Query 16185 TG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243 | || || || ||| || |||||| ||||| || || | ||| ||||| || || Sbjct 286893 CGAGAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTAGCTAAAAGGGTCTTCCCAGT 286952 Query 16244 ACCTGG 16249 ||||| Sbjct 286953 TCCTGG 286958 >seq2 Length=36921656 Score = 122 bits (134), Expect = 1e-22 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| |||||||| || |||| || || || || ||||| |||||||||||||| | Sbjct 1442610 TCCTTCGCTGAGCGCATCGTCGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCTGGAAGC 1442669 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 |||||| | |||| |||||||||||||| || | ||||| || ||| ||||||||| Sbjct 1442670 TTCTGCTCCATTTTCTGGCTCAAGAAGCGCGGCTTGATGCCTGGCCTCACTTTCTCCAAC 1442729 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 || || || || || |||||||| || ||| Sbjct 1442730 GAACTCATTTCCCGCGACGAGGGGCTTCAC 1442759 >seq8 Length=20383548 Score = 120 bits (132), Expect = 4e-22 Identities = 284/423 (67%), Gaps = 12/423 (3%) Strand=Plus/Minus Query 15917 ATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAA 15976 |||||| || ||| | | || || || || | ||||| ||||| || | ||||| Sbjct 11725106 ATCAAGAATGTCAGCCCTGTTAGTAGCTGCAACGACAATGATACCGGTATTACCCTCAAA 11725047 Query 15977 ACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 16036 |||||||| ||||||||||| ||||| | || ||||| | |||||||||| || Sbjct 11725046 TCCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT---CC 11724990 Query 16037 ACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 16093 |||| |||| || | |||| |||| || |||||||| ||||| | || | ||||| Sbjct 11724989 ACCAATTCCAGTACCTCTTTGCCTTCCAACAGCATCAATTTCATCCACAAAAATAATGCA 11724930 Query 16094 TGGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCA 16151 || ||| || || |||| || | ||| || || || || || | |||| Sbjct 11724929 CGGAGCATTCTCTTTGGC--CTTCTTGAATAAATCACGGACTCGAGAAGCACCAATACCA 11724872 Query 16152 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACC 16210 ||||||||||| ||||| | | | | | |||| || || |||||| | |||||| Sbjct 11724871 ACAAACATCTCAACAAACTCAGAACCTG-AGATTGAGAAAAACGGGACACCTGCTTCACC 11724813 Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 16270 ||||| || || | ||| ||||| || || || || ||| | || || |||| Sbjct 11724812 TGCAATAGCCTTTGCTAAAAGTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAGAACACC 11724753 Query 16271 TCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAAT 16330 | ||| || || ||| || ||| |||||||| | ||| ||||| ||||| | Sbjct 11724752 TTTTGGTATACGTGCCCCAACAGCAGTGTACCTCTCAGGCTTCTTTAGAAACTCCACCAC 11724693 Query 16331 CTC 16333 ||| Sbjct 11724692 CTC 11724690 >seq7 Length=19579009 Score = 111 bits (122), Expect = 2e-19 Identities = 249/369 (67%), Gaps = 14/369 (4%) Strand=Plus/Minus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| ||||||||||| || | ||||||||||||||| ||||||| ||||||||| | Sbjct 16528151 AAACCCATCCATCTCCGTGAGAAGCTGGTTAATAGTCTGTTCCCTCTCATCATTCCC--A 16528094 Query 16034 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 | | | | || || | | ||| | || ||||| |||||||||||||||||||| ||| Sbjct 16528093 CCTCCGAGGCCCGCCCCTCTCTGCCTCCCAACGGCGTCAATCTCATCAATGAAGACAATG 16528034 Query 16092 CATGG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCAC 16147 || || ||| | ||||| | || || | ||||| || | | || ||||| Sbjct 16528033 CACGGTGCCTTGTTCTTCGCCTTC----TCGAACAAATCCCTCACCCTCGAAGCACCCAC 16527978 Query 16148 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 16207 || || |||| |||||| || | | || | || || || || || | || Sbjct 16527977 CCCCACGAACAGCTCCACGAACTCCGACGCCGCGCACGAGAAAAACGGCACTCCGGCCTC 16527918 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267 ||||| | || | || || || ||||| ||||| || ||| ||| | | || | | Sbjct 16527917 CCCCGCCACCGCCCTCGCCAGCAGCGTCTTCCCCGTCCCCGGCGGCCCCACCA-GAAGAC 16527859 Query 16268 ACCTCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCA 16326 ||| | | |||||||| ||||| || ||| | || || | ||| | |||||| | Sbjct 16527858 ACCCCTTCGGAATCTTTGCGCCCAAGGCAGTGTACTTATCGGGATTCTTCAAAAAATCAA 16527799 Query 16327 CAATCTCTT 16335 ||| ||||| Sbjct 16527798 CAACCTCTT 16527790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620458906945920