Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq15183 113 1e-20 seq20171 95.1 4e-15 >seq15183 Length=501 Score = 113 bits (124), Expect = 1e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 21314 CCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACCG 21373 || ||||| | || |||||||| ||||| ||||| ||| | || || |||||||| || Sbjct 151 CCTGTGATTGCACTATCGCAGCTTAACCGTTCCCTCGAGAACCGTCCCAACAAGCGTCCC 92 Query 21374 ATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTC 21433 ||||||| ||| | || || || || || ||||||||||||||||| |||||||||| Sbjct 91 GTGATGTCAGACTTACGTGAATCTGGTGCAATCGAGCAGGACGCCGACTTGATCATGTTT 32 Query 21434 GTGTACCGCGACGAGGTCTA 21453 | ||||| || || ||||| Sbjct 31 ATTTACCGTGATGAAGTCTA 12 >seq20171 Length=357 Score = 95.1 bits (104), Expect = 4e-15 Identities = 57/60 (95%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 47536 ACAGGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCAT 47595 || ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 151 ACTGGATTTAGGTTCCAGCGCCGCAAGGTGTGAGAGTTCGAGTCTCTCCGTCCCCACCAT 92 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157042235296304