Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq10421 109 1e-18 >seq10421 Length=836 Score = 109 bits (120), Expect = 1e-18 Identities = 131/176 (74%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 22968 TTCGCACTCTTCATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGAT 23027 ||| ||| |||| |||||||| ||||||| |||||||| ||| || || || || || Sbjct 304 TTCACACACTTCGTCAGATTCGAAGAACAACATTTGTGCAACACCCTCACCTGCATAAAT 245 Query 23028 CAGTGCCGG--GCTTGGTGTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTCCATTCT 23085 |||| || | || || ||||| || ||||| | ||||| |||| ||| || Sbjct 244 ACGTGCAGGAAGATTAGTT--GTATTCGAGAACTCTAAAGTAACATGACCTTCCCACTCA 187 Query 23086 GGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTGCC 23141 || || || || |||||||||||||| || |||||||| ||||| |||||||| || Sbjct 186 GGCTCAAGTGGTGTGACGTTTACGATAATACCGCAACGTGCATAGGTCGATTTACC 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897183669002880