Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_017984.1 Length=46387 Score E Sequences producing significant alignments: (Bits) Value seq24717 125 2e-24 >seq24717 Length=291 Score = 125 bits (138), Expect = 2e-24 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 31940 ACTGCATATGATGATGGTGTTGGCGTGTGGACTATCGGCATAGGTACAACCATCTACCCA 31999 ||||| ||||| ||||| || || |||||||| || || | ||||| || | || || Sbjct 278 ACTGCCTATGACGATGGGGTGGGAGTGTGGACGATTGGTTTCGGTACCACAGTTTATCCG 219 Query 32000 AATGGTACAAAAGTTAAGAAAGGCGATACATGTACATCTGAACAAGCAAAAACCTACTTC 32059 || || | ||||||| |||||||||||| || || | |||||| || || ||| | Sbjct 218 AACGGCATTAAAGTTATGAAAGGCGATACCTGCACGGAAGCACAAGCTAAGACATACATG 159 Query 32060 AAACATGATTTAGTTAAGTTTGAAAATGTTGTAAATGAATCCGTTAAAGTTCCACTTAGT 32119 |||||||||| ||||||||| || ||| || | || ||| | || |||| | Sbjct 158 GCACATGATTTAAAGAAGTTTGAATCTGCTGTCAACAATGAGGTGAAAATACCGCTTAAT 99 Query 32120 CAGAATCAATTTGATGCTCTAGTGTCACTGACCTACAACATCGG 32163 || ||||| || || || || |||||||| |||||||||| || Sbjct 98 CAAAATCAGTTCGACGCACTGGTGTCACTTGCCTACAACATTGG 55 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148252450531568