Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_018087.3 Length=166687 Score E Sequences producing significant alignments: (Bits) Value seq28520 100 3e-16 seq7241 86.0 7e-12 >seq28520 Length=252 Score = 100 bits (110), Expect = 3e-16 Identities = 72/83 (87%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 75945 TGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTAACC 76004 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 237 TGGTGGGCCCAGACAGACTTGAACTGTCGACCAACGGATTATGAGTCCGCTGCTCTAACC 178 Query 76005 AATTGAGCTAAAGGCCCAAAAAT 76027 || ||||||| |||||| || || Sbjct 177 AACTGAGCTATAGGCCCTAATAT 155 >seq7241 Length=1514 Score = 86.0 bits (94), Expect = 7e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 6163 ATCAATAGAAGAGAATTGTGCAATAATAGTCAAACCTACTGAAATGAAGATAAGACCGAC 6222 ||||||| |||||||| ||||||||||| | || | | ||| || | ||||| Sbjct 1213 ATCAATATTTGAGAATTGCGCAATAATAGTGAGCCCCAAGGTAATAAAACCGATACCGAG 1272 Query 6223 CCATGCACCAAGGTCTAAATTTTGATTAAGCATTATTTTTGCAAGAAATGCAGTAGCAAC 6282 |||| || | | || | || || | | | ||| ||||||| ||| || |||| Sbjct 1273 CCATCCAGCCAAATCGATGTTCTGCCCTAAAAATGCTTTAGCAAGAAGTGCTGTGGCAAT 1332 Query 6283 GGCACCAAGGCCTGACCACATAACATACAATATACCAGCTTGCATATATTTTAATGC 6339 | |||||| ||| ||||||| ||||| || || || ||||||||| ||||||| || Sbjct 1333 GACACCAATGCCAGACCACAGCACATATAAAATTCCCGCTTGCATAAATTTTAAGGC 1389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533026855408320