Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_018856.1 Length=153962 Score E Sequences producing significant alignments: (Bits) Value seq9542 86.0 6e-12 seq9786 82.4 8e-11 >seq9542 Length=931 Score = 86.0 bits (94), Expect = 6e-12 Identities = 76/94 (81%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 6763 CCATGGAGGGTTGGCAGAGTGGATTATTGCAGCGGTCTTGAAAACCGCCGAGG--GTAAA 6820 ||||||| | |||||||| || ||| |||| ||||||||||||||| ||||| || | Sbjct 98 CCATGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTGAG 39 Query 6821 ACCTCCGTGAGTTCAAATCTCACACCCTCCTCCA 6854 ||||||||||||| |||||||| | ||| ||| Sbjct 38 TCCTCCGTGAGTTCGAATCTCACCGCTTCCGCCA 5 >seq9786 Length=898 Score = 82.4 bits (90), Expect = 8e-11 Identities = 76/94 (81%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 6764 CATGGAGGGTTGGCAGAGTGGATTATTGCAGCGGTCTTGAAAACCGCCGAGGG--TA-AA 6820 |||||| | |||||||| || ||| |||| ||||||||||||||| |||||| || | Sbjct 278 CATGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGCTTATAC 219 Query 6821 ACCTCCGTGAGTTCAAATCTCACACCCTCCTCCA 6854 ||||||||||||| |||||||| | ||| ||| Sbjct 218 CCCTCCGTGAGTTCGAATCTCACCGCTTCCGCCA 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492325452232320