Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq27021 86.0 1e-12 >seq27021 Length=265 Score = 86.0 bits (94), Expect = 1e-12 Identities = 127/179 (71%), Gaps = 6/179 (3%) Strand=Plus/Plus Query 27935 CTGTTTGCTTTTGAGAACTACACCCGTACGGCGCAGGTGCTGGCTGACACTATGGCGGAG 27994 || ||| |||| ||||||||||| || ||||| || | | |||||||| | || || Sbjct 43 CTATTTCCTTTCGAGAACTACACACGCACGGCTCAAATCATTGCTGACACGGTTGCTGAA 102 Query 27995 GCGCACATGTGGGCGGTGGATGGCGTGCTTAATCCGTCGCTGGCCCGCGACATTATTGAA 28054 ||||| |||||||| || ||| ||| |||| || |||||| ||||| | ||||| Sbjct 103 GCGCATATGTGGGCAGTCGATAAACCACTTCATCCATCACTGGCCAGCGACCTCATTGAG 162 Query 28055 GGACTACGCGCCAAGATGCGCAGT---CTGGTCAACCAGGGATACCTGATTGGTGGTGA 28110 || | |||||||| | |||| || ||| | || ||||| || |||||||| Sbjct 163 GGCATTCGCGCCAA---ACTCAGTGACCTAACCAATAACGGCTACCTCATGGGTGGTGA 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109005485806928