Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 168 1e-36 >seq2 Length=36921656 Score = 168 bits (186), Expect = 1e-36 Identities = 555/852 (65%), Gaps = 18/852 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||| || |||||||| | ||||||||||| || |||||||||| |||||| || ||| Sbjct 1443062 CTGATACTCCCCCACGCGCTTCTCAAAGAAATTGGTCTTCCCCTGCAACGAAATCAGCTC 1443003 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG--GCCCATCTGTTCCAGC 47956 ||| || || ||||| | || |||||| | | | ||| | | ||| | Sbjct 1443002 CATCCAGTCAAAAGGGTTCTGAACATTGTACACC--TTCCCGCAGCCAAGCGCAACCAAC 1442945 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 | ||||||| || |||| ||||| | ||| | ||||| || | | Sbjct 1442944 AAACGATCCGCCACAAACTCAATGTACTGACCCATCAACTCCCCATTCATCCCCAGCAAC 1442885 Query 48017 GA-CACGGGCAAAGC-CTTTGTG-AGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 | ||||| |||| | | | | ||||||| |||| || | ||| || |||| ||| Sbjct 1442884 GCGCACGG---AAGCGCGTCGCACACAAACTCCCTCTCGATATCCACAGCGTCCCTCACG 1442828 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 |||| ||| ||||| ||| | | || || | ||| | | |||| |||| Sbjct 1442827 ATCTCCTTCACGCGCTCCTCGCTGAGCTTCTTCCTCAGCAGAGAGTACAAGAG---GCAG 1442771 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| | ||| | || ||||| ||| ||||| |||||||||| ||| ||| Sbjct 1442770 GCGAAGTCGCAGTGAAGCCCCTCGTCGCGGGAAATGAGTTCGTTGGAGAAAGTGAGGCCA 1442711 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | || |||||||||||||| | ||| |||||||||||||| Sbjct 1442710 GGCATCAAGCCGCGCTTCTTGAGCCAGAAAATGGAGCAGAAGCTTCCAGAGAAGAAGATT 1442651 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || ||||| ||| || | ||| |||| || || ||| |||| Sbjct 1442650 CCCTCGACGCAGGCGAAGGCGACGATGCGCTCAGCGAAGGAGTCGGAGGAGTC---GATC 1442594 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 ||| || ||||| | |||||||| | ||| || || || || ||||| ||||| Sbjct 1442593 CAGCGCAGGGCCCATTGGGCCTTCTTGGCAACGCAGGGGATGGTTTCGATGGCGTGGAAG 1442534 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 || | | ||| | | | | | ||||| ||| || ||||||||| Sbjct 1442533 AGGTGGTGCTTCTCGTCGGAGCTCTTGATGTAGGTTTCGAGGAGGAGGCTGTACATCTCG 1442474 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||| ||||| ||||||||||| | ||||| || || Sbjct 1442473 GAGTGGATGTTCTCGATGGCGATTTGGAAGCCGTAGAAGGCGCGAGCCTCGGCGACTTGG 1442414 Query 48494 ACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 | || | ||| | || || |||||||| ||| || || || || || ||||| Sbjct 1442413 ATCTCCTTCATGAAGC-GGCCGGCGAGATTCTCGAGGACGATGCCGTCGGAGGCGGCAAA 1442355 Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTG 48612 |||||| ||||| || | | ||| ||||| ||| || |||||| | | |||| | Sbjct 1442354 GAAGGCGAGGACGTGGGTGACGAAGTGGCGTTCGCCGTCGGTGAGGGAGTCCCAGTGGCG 1442295 Query 48613 TACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTA 48672 | ||| | ||||| || || ||| | |||||||| || || ||||| ||||| Sbjct 1442294 GAGGTCCTGCGAGAGGTCGACCTCCTCCGCCGTCCAGAAAGAGGCTTCGGCTTTCTTGTA 1442235 Query 48673 CATGCCCCATAT 48684 ||| |||| || Sbjct 1442234 CATTTCCCAGAT 1442223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931107368970240