Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq12907 140 5e-28 >seq12907 Length=631 Score = 140 bits (154), Expect = 5e-28 Identities = 218/311 (70%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 139421 ATGCTTACAAGAAATAGAAAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCAT 139480 ||||| ||| || | |||||| ||||||||||||||||| ||||| || || || || Sbjct 229 ATGCT--CAATGAACACAAAAGGCATTATTTTAGCAGGTGGCTCTGGTACACGACTGTAT 286 Query 139481 CCATTGACTATCAGTGTTTCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTAC 139540 || | || |||| ||||||||| || | ||| | |||||||||||||||||||| Sbjct 287 CCGATTACCCAAGGTGTATCGAAACAGCTACTGCCTATTTACGATAAACCAATGATTTAT 346 Query 139541 TATCCATTGACAACTCTTATCGAAGCTGGTATAAACGAAATACTTATAATATCAACACCA 139600 ||||||||| || || || || || || | || | || || || |||| || Sbjct 347 TATCCATTGTCAGTACTGATGTTGGCAGGAATTCAGGATGTTCTGATCATTACAACTCCT 406 Query 139601 CAGGATAGAAATTCTTTCGAGAACTTACTAGGTAACGGTTCACAATTTGGTGTTAGAATA 139660 | || | || ||| | ||||||||| || || | || || ||| || || || Sbjct 407 GAAGACTTAGATAGTTTTAAACGCTTACTAGGCAATGGGGCTCAGTTCGGTATTCGATTA 466 Query 139661 GAATACGCTGTTCAAGAAAAACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAA 139720 || || || |||| || || |||||||||||||||| || |||| |||||||| Sbjct 467 GAGTATGCCATTCAGCCAAGTCCAGATGGTTTAGCACAAGCATTTATTATTGGTGAAGAG 526 Query 139721 TTCATAGGTAA 139731 || || || || Sbjct 527 TTTATTGGCAA 537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701541859441920