Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq9786 95.1 5e-15 seq9542 87.8 7e-13 >seq9786 Length=898 Score = 95.1 bits (104), Expect = 5e-15 Identities = 78/93 (84%), Gaps = 3/93 (3%) Strand=Plus/Minus Query 7809 ATGGAGGCGTGGCAGAGTGGTTTAATGTACTGGATTTGAAATCCAGCGACGG--TA-ACC 7865 ||||| ||||||||||| ||||||||| || || |||||| || ||| || || ||| Sbjct 277 ATGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGCTTATACC 218 Query 7866 CGTCCGTGAGTTCGAATCTCACCGCCTCCGCCA 7898 | ||||||||||||||||||||||| ||||||| Sbjct 217 CCTCCGTGAGTTCGAATCTCACCGCTTCCGCCA 185 >seq9542 Length=931 Score = 87.8 bits (96), Expect = 7e-13 Identities = 75/92 (82%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 7809 ATGGAGGCGTGGCAGAGTGGTTTAATGTACTGGATTTGAAATCCAGCGACGGTA--ACCC 7866 ||||| ||||||||||| ||||||||| || || |||||| || ||| ||| | | Sbjct 96 ATGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTGAGTC 37 Query 7867 GTCCGTGAGTTCGAATCTCACCGCCTCCGCCA 7898 ||||||||||||||||||||||| ||||||| Sbjct 36 CTCCGTGAGTTCGAATCTCACCGCTTCCGCCA 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201231955014648