Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq10382 113 7e-20 seq36536 87.8 3e-12 seq870 87.8 3e-12 seq776 86.0 1e-11 >seq10382 Length=839 Score = 113 bits (124), Expect = 7e-20 Identities = 219/319 (69%), Gaps = 12/319 (4%) Strand=Plus/Plus Query 123072 TGTCCTGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTG 123131 |||| |||||||| |||||||||||||| || | || |||| || || ||||| |||| Sbjct 91 TGTCTTGTCAGCTCTATCAGCGCAGTGCCGATGTATTTTTAGGTGTGCCTTTTAATATTG 150 Query 123132 CCTCTTACGCGCTCCTGATACACATGTTTGCCCAGCAGGC--CAATATGGCAGTAGGTGA 123189 || ||| ||||| || | || ||| | || || || | | | | | || || || Sbjct 151 CCAGTTATGCGCTACTCACCCATATGATCGCACA--AGTCTGCGGTTTAGGTGTGGGGGA 208 Query 123190 CTTCGTGTGGACGGGTGGGGATGTGCATCTGTACTCCAACCACCTGGAGCAGGCAGATTT 123249 ||| || ||||||||||| ||| ||| | || ||||||| | ||||| ||| | | Sbjct 209 CTTTGTCTGGACGGGTGGCGATACACATTTATATGCCAACCATTTTGAGCAAGCAAAGCT 268 Query 123250 GCAGTTAACTCGCGAACCTCATCCGTTACCACAACTGCGGATTAAACGTCGTCCGGATT- 123308 ||||||| || |||||| | | |||||| | || || | | |||| Sbjct 269 TCAGTTAAGCCGTGAACCTTTAGGGCTGTGCCAACTGAAACTGAA---TCCTGC-GATTA 324 Query 123309 ---CTATCTTCGACTATAAGTTTGAAGATTTCGAAGTGGTCGGATACGAATCGCATGACG 123365 ||| ||||||| ||| ||||||||| ||||| | || || || ||||||||| | Sbjct 325 AAGATATTTTCGACTTTAAATTTGAAGATATCGAAATCGTGGGTTATGAATCGCATCCAG 384 Query 123366 CTATTAAGGCACCGGTGGC 123384 ||||| ||||| || || Sbjct 385 GGATTAAAGCACCTGTTGC 403 >seq36536 Length=153841 Score = 87.8 bits (96), Expect = 3e-12 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 169717 CACCCATTT---TAGGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAG 169773 ||||| ||| | ||||||||| ||| |||||| |||| ||||||||||| |||||| Sbjct 31769 CACCCTTTTCCCTGGGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAA 31827 Query 169774 GTCGCGGGTTCGAGCCCCGTCAGTCC 169799 | ||||||||||||||||||||||| Sbjct 31828 GCTGCGGGTTCGAGCCCCGTCAGTCC 31853 >seq870 Length=96095 Score = 87.8 bits (96), Expect = 3e-12 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 169717 CACCCATTT---TAGGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAG 169773 ||||| ||| | ||||||||| ||| |||||| |||| ||||||||||| |||||| Sbjct 31653 CACCCTTTTCCCTGGGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAA 31595 Query 169774 GTCGCGGGTTCGAGCCCCGTCAGTCC 169799 | ||||||||||||||||||||||| Sbjct 31594 GCTGCGGGTTCGAGCCCCGTCAGTCC 31569 >seq776 Length=110407 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| |||||| |||| ||||||||||| |||||| | ||||||||||| Sbjct 80141 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 80199 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 80200 CCCCGTCAGTCC 80211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777276855465600