Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq706 96.9 3e-15 seq11 95.1 1e-14 >seq706 Length=122390 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || ||||| || || || || || || || |||||| || || ||| Sbjct 22562 AATGCAGATCTTTGTGAAGACTTTGACAGGAAAGACAATTACCTTGGAGGTTGAGAGTTC 22503 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || ||||| ||||| ||||| |||||| | || ||| || Sbjct 22502 AGATACAATTGATAATGTCAAGGCTAAAATTCAGGACAAGGAGGGAATCCCACCAGACCA 22443 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||||| | |||||||| || || |||||||||||| | ||| | || || ||||| Sbjct 22442 GCAGAGGTTGATCTTTGCTGGGAAGCAATTGGAAGATGGAAGGACTCTTGCTGACTATAA 22383 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 |||||| ||||| |||||||| ||| | || || Sbjct 22382 CATTCAGAAAGAGTCTACTCTTCACCTTGTGTT 22350 >seq11 Length=48970052 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| ||||| | || || || ||||||||| || |||| || Sbjct 43337419 ATGCAAATATTTGTGAAAACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 43337478 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | || | || ||||| | || ||||| ||||| | || |||||| Sbjct 43337479 GATACTATTGACAATGTTAAAGCAAAGATTCAG-GACAAGGAGGGCATTCCACCAGATCA 43337537 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||||| ||||| ||||| || || |||||||||||| | || |||| || ||||| Sbjct 43337538 GCAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCGGACTATAA 43337597 Query 28733 CATTCAAAAAGAATCTACT 28751 ||||| || ||||| ||| Sbjct 43337598 TATTCAGAAGGAATCCACT 43337616 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| || ||||| ||||| || ||| || ||| |||| Sbjct 43336735 ATGCAAATTTTCGTCAAAACTTTGACGGGAAAAACTATCACCTTGGAGGTGGAGAGTTCA 43336794 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || || || | || ||||| ||||| | || ||| || Sbjct 43336795 GATACCATTGATAATGTAAAAGCCAAGATTCAG-GACAAGGAGGGTATCCCACCAGACCA 43336853 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||||||||||||||||| || ||||| | |||||| | ||| | || |||||||| Sbjct 43336854 GCAGAGACTTATCTTTGCTGGAAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAA 43336913 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 ||| || || || || || |||||| |||| || Sbjct 43336914 CATCCAGAAGGAGTCCACCCTGCACTTGGTGTT 43336946 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| ||||| ||||| || || ||||||||| || |||| || Sbjct 43329858 ATGCAAATATTTGTGAAAACTTTAACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 43329917 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | ||| ||| || ||||| || || | ||| || || Sbjct 43329918 GATACTATTGACAGTGTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCCCCGGACCAG 43329977 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| ||||| ||||| || || |||||||||||| | || |||| ||||| || Sbjct 43329978 CAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCTGATTACAAT 43330037 Query 28734 ATTCAAAAAGAATCTAC 28750 ||||| ||||| || || Sbjct 43330038 ATTCAGAAAGAGTCCAC 43330054 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| || || ||||| ||||| ||| || |||| ||| Sbjct 43336507 ATGCAGATCTTTGTGAAAACTTTGACCGGTAAGACCATCACCCTTGAGGTGGAAAGCTCA 43336566 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | || || ||| ||||||||||| | || |||||| Sbjct 43336567 GACACCATCGACAATGTGAAAGCCAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCAA 43336626 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || || ||||| ||||| || | || || | ||| | |||||||| ||| Sbjct 43336627 CAGAGGCTGATTTTTGCTGGCAAGCAGCTCGAGGACGGGAGAACCCTCGCCGATTACAAC 43336686 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| || || || || || || |||| || | ||| |||| || || Sbjct 43336687 ATTCAGAAGGAGTCCACCCTCCATTTGGTGCTACGTTTAAGAGGTGGCAT 43336736 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| || ||||| || || || ||| || ||| |||| Sbjct 43329174 ATGCAAATTTTCGTCAAAACTTTGACGGGAAAGACTATCACCTTGGAGGTTGAAAGTTCA 43329233 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || ||| | | || | || || || | || ||||| ||||| | || ||| || Sbjct 43329234 GATACGATTGATAATGTGAAAGCCAAGATTCAG-GACAAGGAGGGTATCCCACCAGACCA 43329292 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||||| ||||||||||| || ||||| |||||||| | ||| | || ||||| || Sbjct 43329293 GCAGAGGCTTATCTTTGCTGGGAAACAGCTGGAAGATGGAAGAACCCTTGCGGATTACAA 43329352 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 ||| || || || || || || ||| |||| || Sbjct 43329353 CATCCAGAAGGAGTCCACCCTCCACTTGGTTTT 43329385 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| || || ||||| ||||| ||| ||| |||| ||| Sbjct 43328946 ATGCAGATCTTTGTGAAAACTTTGACCGGTAAGACCATCACCCTCGAGGTGGAAAGCTCA 43329005 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | || || ||| || || ||||| | || |||||| Sbjct 43329006 GACACCATAGACAATGTGAAAGCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGATCAA 43329065 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || || ||||| ||||| || | || || | ||| | |||||||| ||| Sbjct 43329066 CAGAGGCTGATTTTTGCTGGCAAGCAGCTCGAGGACGGGAGAACCCTCGCCGATTACAAC 43329125 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| || || || || || || |||| || | ||| |||| || || Sbjct 43329126 ATTCAGAAGGAGTCCACCCTCCATTTGGTGCTACGTTTAAGAGGTGGCAT 43329175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425215374687144