Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_020841.1 Length=40803 Score E Sequences producing significant alignments: (Bits) Value seq15183 87.8 5e-13 >seq15183 Length=501 Score = 87.8 bits (96), Expect = 5e-13 Identities = 128/180 (71%), Gaps = 1/180 (1%) Strand=Plus/Minus Query 13020 AGCTTAAACGGT-TCGGTAAAGAGTTTAATTGTCCAGTTATCGCACTGTCACAGCTTAAC 13078 |||||||| | | | | ||||| | | ||||| || || ||||| || ||||||||| Sbjct 184 AGCTTAAAAGCTCTTGCCAAAGAAATGATGTGTCCTGTGATTGCACTATCGCAGCTTAAC 125 Query 13079 CGTAGCTTAGAGAGCCGACCAAACAAACGGCCCATCATGAGCGACCTAAAAGAGTCAGGG 13138 ||| | | |||| ||| || ||||| || ||| | ||| ||| || || || || Sbjct 124 CGTTCCCTCGAGAACCGTCCCAACAAGCGTCCCGTGATGTCAGACTTACGTGAATCTGGT 65 Query 13139 GCCATTGAGGAAAACGCTGACGTGATTATGTTCCTGTACCGCGATGAGGTTTATAACGAA 13198 || || ||| | |||| ||| |||| ||||| | ||||| ||||| || |||||| || Sbjct 64 GCAATCGAGCAGGACGCCGACTTGATCATGTTTATTTACCGTGATGAAGTCTATAACAAA 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130391403178480