Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq848 125 1e-23 seq11 122 2e-22 seq706 118 2e-21 >seq848 Length=99386 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| | |||||| || || | || | ||||| |||||| || || ||||||| Sbjct 57677 CCACCGCGAAGACGCAAAACAAGGTGAAGAGTAGACTCTTTCTGAATGTTGTAATCAGCA 57618 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | || | | |||| || ||||| || ||||||||||| || ||||| || || ||||| Sbjct 57617 AGAGTCCTTCCATCCTCTAATTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGG 57558 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 ||||| || || ||||| ||||| ||| |||||| || | ||||| ||| || Sbjct 57557 ATTCCCTCCTTGTCTTGGATTTTGGCTTTGACATTATCAATCGTGTCTGAACTTTCAACC 57498 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || | ||||| || || ||||| || || || | |||||||||||| Sbjct 57497 TCCAAGGTAATAGTCTTTCCAGTCAAAGTCTTGACAAATATCTGCAT 57451 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| | |||||| || || | || | ||||| |||||| || || ||||||| Sbjct 64294 CCACCACGAAGACGCAAGACAAGGTGAAGAGTAGACTCTTTCTGAATGTTGTAATCAGCA 64235 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | || | | |||| |||||||| || ||||||||||| || || ||||| || ||||| Sbjct 64234 AGAGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTTTGTTGGTCTGGTGGA 64175 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 ||||| || || ||||| ||||| ||| ||||| |||| ||||| ||| || Sbjct 64174 ATTCCCTCCTTGTCTTGGATTTTTGCTTTGACATTGTCAATAGTGTCTGAACTTTCAACC 64115 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || | ||||| || || ||||| || || || | ||| |||||||| Sbjct 64114 TCCAAGGTAATAGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 64068 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||||| | || || || | || | ||| || ||| || ||||| Sbjct 56540 ATTCCACCACGGAGACGGAGCACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAATCG 56481 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | || || ||||||||||| | | || || || ||| Sbjct 56480 GCGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCGGGT 56421 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| || ||||| ||| | |||||| ||| Sbjct 56420 GGGATGCCTTCCTTGTCTTGAATTTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCT 56361 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||||| ||||||||||| || | || |||| || || ||||| Sbjct 56360 ACTTCGAGAGTGATGGTTTTACCGGTGAGGGTCTTAACGAAGATTTGCAT 56311 >seq11 Length=48970052 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| || || || ||||||| ||| | || || |||||| || ||| Sbjct 43329859 ATACCACCACGAAGCCGCAACACCAAATGTAGAGTGGATTCCTTCTGGATATTGTAGTCA 43329800 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| |||| || || ||||||||||| | ||||| ||||| ||| Sbjct 43329799 GCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTCTGCTGATCCGGT 43329740 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| ||||| || || ||| || |||||| ||||| || || ||| Sbjct 43329739 GGAATACCTTCCTTATCCTGAATCTTAGCCTTCACATTATCTATAGTGTCAGAACTTTCA 43329680 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||||||||| || || || | || || | |||||| ||||| Sbjct 43329679 ACCTCCAAAGTAATGGTCTTTCCCGTCAGAGTCTTCACAAATATTTGCAT 43329630 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| || || || ||||||| ||| | || || |||||| |||||| Sbjct 43337420 ATACCACCACGAAGGCGCAACACCAAATGTAGAGTGGATTCCTTCTGGATATTGTAATCA 43337361 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| |||| || || ||||||||||| | ||||| || || ||| Sbjct 43337360 GCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGT 43337301 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || ||||| || || ||| || ||||| |||| ||| || ||| Sbjct 43337300 GGAATGCCCTCCTTATCCTGAATCTTAGCCTTCACATTGTCAATAGTATCAGAACTTTCA 43337241 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| ||||| || || || || || || | ||| |||||||| Sbjct 43337240 ACCTCCAAAGTTATGGTCTTCCCTGTCAAAGTCTTCACAAAAATCTGCAT 43337191 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||| | || || ||||| | ||| | |||||| ||| || ||||| Sbjct 43329631 ATGCCACCACGAAGCCTCAAAACCAAATGCAGAGTGGACTCTTTCTGGATGTTGTAATCC 43329572 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | |||| | |||| || | |||||||||||||||||| | ||||| || || ||| Sbjct 43329571 GCAAGGGTTCTTCCATCTTCGAGTTGTTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGT 43329512 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || || ||| || ||| || | |||||| ||| Sbjct 43329511 GGAATACCCTCCTTGTCCTGAATCTTGGCTTTCACGTTATCAATGGTATCTGAACTTTCA 43329452 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| ||||| || || || || || || | ||| |||||||| Sbjct 43329451 ACCTCCAAAGTTATGGTCTTTCCCGTCAAAGTCTTCACAAAAATCTGCAT 43329402 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | ||||| || ||||| | || | ||| || || || ||||| Sbjct 43329175 ATGCCACCTCTTAAACGTAGCACCAAATGGAGGGTGGACTCCTTCTGAATGTTGTAATCG 43329116 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | |||| | || || | || || |||||||| || | ||||||||||| || Sbjct 43329115 GCGAGGGTTCTCCCGTCCTCGAGCTGCTTGCCAGCAAAAATCAGCCTCTGTTGATCCGGA 43329056 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || ||||| || || || ||| ||||| ||| | ||||| ||| Sbjct 43329055 GGGATACCCTCCTTATCCTGGATCTTGGCTTTCACATTGTCTATGGTGTCTGAGCTTTCC 43328996 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| ||||| || || ||||| | ||| |||||||| Sbjct 43328995 ACCTCGAGGGTGATGGTCTTACCGGTCAAAGTTTTCACAAAGATCTGCAT 43328946 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||| || || || || || | || | ||| || ||| |||||||| Sbjct 43336964 ATGCCACCACGAAGCCGCAACACCAAGTGCAGGGTGGACTCCTTCTGGATGTTATAATCC 43336905 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | |||| | |||| || | ||||| ||||||||||| | |||||| || || ||| Sbjct 43336904 GCAAGGGTTCTTCCATCTTCAAGCTGTTTTCCAGCAAAGATAAGTCTCTGCTGGTCTGGT 43336845 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || || |||||||||| || | |||||| || Sbjct 43336844 GGGATACCCTCCTTGTCCTGAATCTTGGCTTTTACATTATCAATGGTATCTGAACTCTCC 43336785 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || || ||||| || || || ||||| | || || ||||| Sbjct 43336784 ACCTCCAAGGTGATAGTTTTTCCCGTCAAAGTTTTGACGAAAATTTGCAT 43336735 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | ||||| || ||||| | || | ||| || || || ||||| Sbjct 43336736 ATGCCACCTCTTAAACGTAGCACCAAATGGAGGGTGGACTCCTTCTGAATGTTGTAATCG 43336677 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | |||| | || || | || || |||||||| || | ||||||||||| || Sbjct 43336676 GCGAGGGTTCTCCCGTCCTCGAGCTGCTTGCCAGCAAAAATCAGCCTCTGTTGATCCGGA 43336617 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||| || || || || ||| ||||| || | ||||| ||| Sbjct 43336616 GGGATACCCTCTTTGTCCTGGATCTTGGCTTTCACATTGTCGATGGTGTCTGAGCTTTCC 43336557 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| ||||| || || ||||| | ||| |||||||| Sbjct 43336556 ACCTCAAGGGTGATGGTCTTACCGGTCAAAGTTTTCACAAAGATCTGCAT 43336507 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||| || || || || || | || | ||| || ||| || ||||| Sbjct 43329403 ATGCCACCACGAAGCCGCAAAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCC 43329344 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | |||| | |||| |||| ||||| ||||||||||| | ||||| || || ||| Sbjct 43329343 GCAAGGGTTCTTCCATCTTCCAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGT 43329284 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || || ||| |||||| || | |||||| ||| Sbjct 43329283 GGGATACCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATCGTATCTGAACTTTCA 43329224 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || || || || || || || ||||| | || || ||||| Sbjct 43329223 ACCTCCAAGGTGATAGTCTTTCCCGTCAAAGTTTTGACGAAAATTTGCAT 43329174 >seq706 Length=122390 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| | |||||| || || | || | ||||| |||||| || ||||| |||| Sbjct 22335 CCACCACGAAGACGCAACACAAGGTGAAGAGTAGACTCTTTCTGAATGTTATAGTCAGCA 22394 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | || | | |||| |||||||| || ||||||||||| || ||||| || || ||||| Sbjct 22395 AGAGTCCTTCCATCTTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGG 22454 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 ||||| || || || || |||||| || |||||| || | |||||| || || Sbjct 22455 ATTCCCTCCTTGTCCTGAATTTTAGCCTTGACATTATCAATTGTATCTGAACTCTCAACC 22514 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || | ||||| || || || || || || || | ||| ||||||||| Sbjct 22515 TCCAAGGTAATTGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCATT 22562 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || || ||||| | || || || | |||| ||| || ||||| || || Sbjct 22560 ATTCCTCCCCTCAGACGAAGGACCAAGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCT 22619 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || |||| | |||| || | || || ||||||||||| || || || || || ||| Sbjct 22620 GCTAGAGTTCTTCCATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCTGGT 22679 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| || || || || || ||| || |||||| || | ||||| || Sbjct 22680 GGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTATCGATTGTGTCTGAACTCTCA 22739 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || || |||| || |||| || |||||||| Sbjct 22740 ACCTCAAGGGTGATGGTCTTTCCTGTTAGGGTCTTAACGAAAATCTGCAT 22789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984019147683600