Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2 250 3e-60 >seq2 Length=36921656 Score = 250 bits (276), Expect = 3e-60 Identities = 234/295 (79%), Gaps = 2/295 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||| ||||||||||| ||||| | |||| || |||||| Sbjct 1442473 GAGTGGATGTTCTCGATGGCGATTTGGAAGCCGTAGAAGGCGCGAGCCTCGGCGACTTGG 1442414 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 | |||||||||||| |||||||| || |||||| |||||||||||| |||||| || Sbjct 1442413 ATCTCCTTCATGAAGCGGCCGGCGAGATTCTCGAGGACGATGCCGTCGGAGGCGGCAAAG 1442354 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || |||||||| ||| |||||||| ||| ||||| |||| || |||||||| | Sbjct 1442353 AAGGCGAGGACGTGGGTGACGAAGTGGCGTTCGCCGTCGGTGAGGGAGTCCCAGTGGCGG 1442294 Query 869813 GTGT-CGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 || | ||| |||||| |||||||| || ||||||| ||||| ||||| || ||||| Sbjct 1442293 AGGTCCTGCG-AGAGGTCGACCTCCTCCGCCGTCCAGAAAGAGGCTTCGGCTTTCTTGTA 1442235 Query 869872 CATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTG 869926 ||| ||||| | ||| |||| |||| ||||| | | ||||||| ||||||| Sbjct 1442234 CATTTCCCAGATTTGGGGGTACTGGATTGGGAACATGCAGAAGCGGTCGGGGTTG 1442180 Score = 149 bits (164), Expect = 8e-30 Identities = 197/273 (72%), Gaps = 8/273 (3%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| || | ||||||| || | |||||| ||||| | |||||||||| Sbjct 1442752 CCCTCGTCGCGGGAAATGAGTTCGTTGGAGAAAGTGAGGCCAGGCATCAAGCCGCGCTTC 1442693 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| || |||| |||||| || || ||||| ||||| ||||||||| ||| ||| Sbjct 1442692 TTGAGCCAGAAAATGGAGCAGAAGCTTCCAGAGAAGAAGATTCCCTCGACGCAGGCGAAG 1442633 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTC-GAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 ||| || ||||| || |||| ||| |||| || |||||| || ||||| Sbjct 1442632 GCGACGATGCGCTCAGCGAAGGAGTCGGAGG-------AGTCGATCCAGCGCAGGGCCCA 1442580 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 | |||||| || || | || | || ||||||||| | |||||||||| ||| || Sbjct 1442579 TTGGGCCTTCTTGGCAACGCAGGGGATGGTTTCGATGGCGTGGAAGAGGTGGTGCTTCTC 1442520 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAG 869451 | | | | ||||| ||||| |||| ||||| Sbjct 1442519 GTCGGAGCTCTTGATGTAGGTTTCGAGGAGGAG 1442487 Score = 107 bits (118), Expect = 2e-17 Identities = 212/311 (68%), Gaps = 6/311 (2%) Strand=Plus/Minus Query 868700 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 868759 ||||| ||||||||| ||| || || |||||||| |||| | ||| |||| ||||||| Sbjct 1443058 TACTCCCCCACGCGCTTCTCAAAGAAATTGGTCTTCCCCTGCAACGAAATCAGCTCCATC 1442999 Query 868760 CACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGG 868819 || || ||||| | ||||| ||| |||| || |||| | | || || Sbjct 1442998 CAGTCAAAAGGGTTCTGAACATTGTACACCTTCCCGCAGCCAAGCGCAACCAACAAACGA 1442939 Query 868820 TCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACC 868879 || || |||||||| |||||||| | ||| | | | ||||| || | | ||| | Sbjct 1442938 TCCGCCACAAACTCAATGTACTGACCCATCAACTCCCCATTCATCCCCAGCAACGCGCAC 1442879 Query 868880 GGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCT- 868938 || |||| |||| ||||||||| ||||||| || || || || | ||||| | | Sbjct 1442878 GGAAGCGCGTCGCACACAAACTCCCTCTCGATATCCACAGCGTCCCTCACGATCTCCTTC 1442819 Query 868939 --GGGCACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCG 868996 | || | ||| | ||| ||| || |||| | ||| | |||||||| |||||| Sbjct 1442818 ACGCGCTCCTCG-CTGAG--CTTCTTCCTCAGCAGAGAGTACAAGAGGCAGGCGAAGTCG 1442762 Query 868997 CAGTGCAACCC 869007 ||||| | ||| Sbjct 1442761 CAGTGAAGCCC 1442751 Score = 89.7 bits (98), Expect = 6e-12 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 1469956 AGGGCGACCGCGATGGCGTCGCGCACCATCTCGACACCGCGCACCGGCGAGTTGAAGCAC 1470015 ||| | ||| ||||| ||||||| | ||| || |||| ||| |||| | Sbjct 24923554 AGGACCACCACGATGCGGTCGCGCCGGAGACGGACGCCCTTCACCTCCGACCGGAAGGAG 24923613 Query 1470016 AGTTCGGCGATGCTCTGGCCGCGGTGGTCGTCCCATATCATGACGC-GATCGTCGCGAAA 1470074 || ||| |||||| | || ||||||||||||| ||||| || | ||| || | | Sbjct 24923614 AGCTCGCCGATGCACCGGGACTGGTGGTCGTCCCAGATCATCACCTTGTTCGGCGGGTAC 24923673 Query 1470075 GCACGGGCTGGCGCCGCCGCCCACCAGCGCGACGATGTTGGACCGGAAGAGCATGGTGGC 1470134 | ||| || |||||||||||| | || | ||||||| | |||||||||||| | | Sbjct 24923674 -CGGGGGTCGGAGCCGCCGCCCACGAAGGCCAGGATGTTGCAGCGGAAGAGCATGTGGAC 24923732 Query 1470135 GAGGCCCACGCCGCCGCC 1470152 ||||||||||||||||| Sbjct 24923733 CAGGCCCACGCCGCCGCC 24923750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104140884741912