Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq706 107 2e-18 seq848 104 2e-17 seq11 104 2e-17 >seq706 Length=122390 Score = 107 bits (118), Expect = 2e-18 Identities = 153/214 (71%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC---C 110328 ||||||||| ||||| || ||| | || || || ||||| ||| | || |||| | Sbjct 23018 AATGCAAATTTTTGTTAAGACTCTCACAGGAAAGACCATAACCCTTGAGGTGGAGAGCTC 22959 Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388 |||| || | | | | || ||| |||||| |||||||| ||| | || || Sbjct 22958 TGAC---ACCATAGACAATGTTAAAGCCAAGATTCAAGACAAAGAGGGCATCCCACCAGA 22902 Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448 ||||| || || |||| ||| || |||||||| ||||||| | |||| |||| ||||| Sbjct 22901 CCAACAGAGGCTCATTTTTGCTGGGAAACAGCTTGAGGATGGCCGAACCTTGGCTGATTA 22842 Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTG 110482 |||||||||||| || || || | ||| ||||| Sbjct 22841 CAACATTCAAAAGGAGTCCACCCTTCACTTGGTG 22808 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || || | || || || ||||| || ||||| |||| | | Sbjct 23245 ATGCAAATCTTTGTTAAGACCCTGACTGGTAAGACCATCACTCTCGAAGTGGAGAGTTCC 23186 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || || |||||| ||||| ||||| | || || || Sbjct 23185 GATACCATAGATAACGTGAAGGCCAAGATTCAAGACAAGGAAGGGATCCCACCAGACCAG 23126 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || |||| ||| || || ||||| ||||||| |||| | || ||||||||| Sbjct 23125 CAGCGTCTCATTTTTGCTGGCAAGCAGCTTGAGGATGGGCGAACCCTTGCCGATTACAAC 23066 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 || ||||| ||||| || | ||| ||||| | | || || || |||| Sbjct 23065 ATCCAAAAGGAATCCACTCTCCACTTGGTGCTCCGTCTCCGCGGTGGAA 23017 >seq848 Length=99386 Score = 104 bits (114), Expect = 2e-17 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC---CT 110329 |||||||| || || || ||| | ||||| || ||||| ||| | || |||| || Sbjct 63612 ATGCAAATCTTCGTTAAGACTCTCACCGGTAAGACCATCACCCTTGAGGTGGAGAGCTCT 63671 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| || | | | | || || |||||| |||||||||||| | || || Sbjct 63672 GAC---ACCATTGACAATGTTAAGGCTAAGATTCAAGACAAAGAAGGCATCCCACCAGAC 63728 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || ||||| ||||||| ||| || |||||||| ||||||| |||||| | || |||||| Sbjct 63729 CAGCAAAGGCTTATTTTTGCTGGGAAACAGCTCGAGGATGGCAGAACCCTAGCTGATTAC 63788 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||| ||||| || || || | ||| |||| Sbjct 63789 AACATCCAAAAGGAGTCCACCCTTCACTTGGT 63820 Score = 102 bits (112), Expect = 7e-17 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC---C 110328 ||||||||||||||| || || ||||||| || || || ||| | || |||| | Sbjct 56538 AATGCAAATATTTGTGAAGACCCTAACCGGAAAGACAATCACCCTTGAGGTGGAGAGCTC 56597 Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388 |||| || | | | | || || |||||| |||||||||||| | || || Sbjct 56598 TGAC---ACCATTGACAACGTCAAGGCTAAGATTCAGGACAAAGAAGGCATCCCACCAGA 56654 Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448 || ||||| || |||| ||| || |||||||| ||||||| | |||| |||| || || Sbjct 56655 CCAGCAAAGGCTCATTTTTGCTGGGAAACAGCTCGAGGATGGCCGAACTTTGGCAGACTA 56714 Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||||||||| || || || | ||| |||| Sbjct 56715 TAACATTCAAAAGGAGTCCACTCTACACTTGGT 56747 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || || || | ||||| |||||||| || ||||| ||| | Sbjct 56311 ATGCAAATCTTCGTTAAGACCCTCACCGGTAAAACCATCACTCTCGAAGTAGAGAGTTCA 56370 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | | || || || ||| ||||| |||||| | || || || Sbjct 56371 GATACCATAGACAATGTTAAGGCCAAAATTCAAGACAAGGAAGGCATCCCACCCGACCAG 56430 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | ||| || || ||||| ||||||| | | || | || ||||||||| Sbjct 56431 CAACGTCTCATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTCGCCGATTACAAC 56490 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 || ||||| || || ||| | ||| ||||| | | || || || |||| Sbjct 56491 ATCCAAAAGGAGTCCACGCTCCACTTGGTGCTCCGTCTCCGTGGTGGAA 56539 >seq11 Length=48970052 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||||||||| || || ||||| || ||| | || |||| | Sbjct 43336735 ATGCAAATTTTCGTCAAAACTTTGACGGGAAAAACTATCACCTTGGAGGTGGAGAGTTCA 43336794 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | |||||| |||||| ||||| || || | || || || Sbjct 43336795 GATACCATTGATAATGTAAAAGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAG 43336854 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || |||||||| | ||| || |||||||| || |||| ||||| | |||||||| ||| Sbjct 43336855 CAGAGACTTATCTTTGCTGGAAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAC 43336914 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484 || || || || || || ||||| ||||||| Sbjct 43336915 ATCCAGAAGGAGTCCACCCTGCACTTGGTGTT 43336946 Score = 102 bits (112), Expect = 7e-17 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGG--AGC-CT 110329 |||||||||||||| ||||||||||| || || ||||||||| | || || ||| || Sbjct 43329858 ATGCAAATATTTGTGAAAACTTTAACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 43329917 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 |||||| | | | || || |||||| ||||| |||||| | ||| ||| Sbjct 43329918 ---GATACTATTGACAGTGTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCCCCGGAC 43329974 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || || ||||||| ||| || || || |||| |||| | || |||| |||||| Sbjct 43329975 CAGCAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCTGATTAC 43330034 Query 110450 AACATTCAAAAAGAATCTACGTTGCA 110475 || ||||| ||||| || || || || Sbjct 43330035 AATATTCAGAAAGAGTCCACCTTACA 43330060 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331 ||||| || ||||| |||||||| ||||| || ||||| ||| | || ||| || | Sbjct 43336507 ATGCAGATCTTTGTGAAAACTTTGACCGGTAAGACCATCACCCTTGAGGTGGAAAGCTCA 43336566 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | | || ||| ||||| |||||||| || | || |||||| Sbjct 43336567 -GACACCATCGACAATGTGAAAGCCAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCA 43336625 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| || || |||| ||| || || ||||| ||||| | ||||| | || |||||||| Sbjct 43336626 ACAGAGGCTGATTTTTGCTGGCAAGCAGCTCGAGGACGGGAGAACCCTCGCCGATTACAA 43336685 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||||| || || || || | || ||||| || Sbjct 43336686 CATTCAGAAGGAGTCCACCCTCCATTTGGTGCTA 43336719 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGG--AGC-CT 110329 |||||||||||||| |||||| | || || || ||||||||| | || || ||| || Sbjct 43337419 ATGCAAATATTTGTGAAAACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 43337478 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 |||||| | | | | || ||| |||||| ||||| || ||| | || ||| Sbjct 43337479 ---GATACTATTGACAATGTTAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGAT 43337535 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || || ||||||| ||| || || || |||| |||| | || ||||||| || Sbjct 43337536 CAGCAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCGGACTAT 43337595 Query 110450 AACATTCAAAAAGAATCTACGTTGCA 110475 || ||||| || ||||| || || || Sbjct 43337596 AATATTCAGAAGGAATCCACTTTACA 43337621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412657768860248