Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq10421 170 3e-37 seq7211 98.7 2e-15 >seq10421 Length=836 Score = 170 bits (188), Expect = 3e-37 Identities = 219/302 (73%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 35454 GTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTCC 35513 || ||||| || || || ||||| ||||| || || || || ||||| |||| || | Sbjct 354 GTTACACCTGTTTGACCTTGGTACTTACCACCACGGTCTTTATACGATGTTTCACACACT 295 Query 35514 TCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGC 35573 |||||| ||||| |||| ||| || || ||||| || || || | ||| || || Sbjct 294 TCGTCAGATTCGAAGAACAACATTTGTGCAACACCCTCACCTGCATAAATACGTGCAGGA 235 Query 35574 AGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGC 35633 || || || || || |||||| | ||| |||||||||||||||||||| || || || Sbjct 234 AGATTAGTTGTATTCGAGAACTCTAAAGTAACATGACCTTCCCACTCAGGCTCAAGTGGT 175 Query 35634 GTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGG 35693 || ||||| ||||| ||||| || || || ||||| |||||||||||||| | Sbjct 174 GTGACGTTTACGATAATACCGCAACGTGCATAGGTCGATTTACCCAAACACACAGTCAAC 115 Query 35694 ACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGA 35753 || || || ||||| ||||| || || || || || || | ||| || |||||||||| Sbjct 114 ACATTACGTGGAATACGGAAATACTCAACGGTACGAGCTAAAGCAAATGAGTTCGGCGGA 55 Query 35754 AT 35755 || Sbjct 54 AT 53 >seq7211 Length=1528 Score = 98.7 bits (108), Expect = 2e-15 Identities = 73/83 (88%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 120226 TTGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCG- 120284 ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 69 TTGCCGGCATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCACAGTTCGA 128 Query 120285 ATCCCTGATGCCGGCACCATATT 120307 |||| || |||||||||||| || Sbjct 129 ATCCGTG-TGCCGGCACCATCTT 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825539603797440