Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2 197 2e-44 seq9 113 7e-19 seq3 105 1e-16 seq4 96.9 5e-14 >seq2 Length=36921656 Score = 197 bits (218), Expect = 2e-44 Identities = 239/325 (74%), Gaps = 8/325 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| || | ||||||| || |||||| ||||| | |||||||||| Sbjct 1442752 CCCTCGTCGCGGGAAATGAGTTCGTTGGAGAAAGTGAGGCCAGGCATCAAGCCGCGCTTC 1442693 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| || |||| ||||| || || ||||| ||||| ||||||||| ||| ||| Sbjct 1442692 TTGAGCCAGAAAATGGAGCAGAAGCTTCCAGAGAAGAAGATTCCCTCGACGCAGGCGAAG 1442633 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCC-AGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 |||||| ||||| || || | ||| ||| || |||||| || ||||| Sbjct 1442632 GCGACGATGCGCTCAGCGAAGGAGTCGGAGGA-------GTCGATCCAGCGCAGGGCCCA 1442580 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 | ||||| || || |||| | || ||||||||| | |||||||||| |||||| Sbjct 1442579 TTGGGCCTTCTTGGCAACGCAGGGGATGGTTTCGATGGCGTGGAAGAGGTGGTGCTTCTC 1442520 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 | | | | ||||| |||||| |||| |||||| ||| |||| ||||||||||| || Sbjct 1442519 GTCGGAGCTCTTGATGTAGGTTTCGAGGAGGAGGCTGTACATCTCGGAGTGGATGTTCTC 1442460 Query 794640 GATGGCGATCTGGAAGCCATAAAAG 794664 ||||||||| |||||||| || ||| Sbjct 1442459 GATGGCGATTTGGAAGCCGTAGAAG 1442435 Score = 194 bits (214), Expect = 3e-43 Identities = 194/249 (78%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| ||||||| ||||||||||||||||||||| || ||||| ||||||||| Sbjct 1442428 GCCTCGGCGACTTGGATCTCCTTCATGAAGCGGCCGGCGAGATTCTCGAGGACGATGCCG 1442369 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| |||||| || |||||||||||||| ||| ||||| || ||| ||||| |||| Sbjct 1442368 TCGGAGGCGGCAAAGAAGGCGAGGACGTGGGTGACGAAGTGGCGTTCGCCGTCGGTGAGG 1442309 Query 796270 GAGACCCAGTGGACCGTGT-CGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 ||| |||||||| || | ||| ||||||||||||||| || ||||| || ||||| Sbjct 1442308 GAGTCCCAGTGGCGGAGGTCCTGCG-AGAGGTCGACCTCCTCCGCCGTCCAGAAAGAGGC 1442250 Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCG 796388 ||||| || |||||||| ||||| || | |||| |||| ||||||| ||||| Sbjct 1442249 TTCGGCTTTCTTGTACATTTCCCAGATTTGGGGGTACTGGATTGGGAACATGCAGAAGCG 1442190 Query 796389 ATTGGGGTT 796397 | |||||| Sbjct 1442189 GTCGGGGTT 1442181 Score = 86.0 bits (94), Expect = 1e-10 Identities = 171/247 (69%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 793899 GCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 793958 ||||| |||||| ||||||||| ||| || || |||||||| |||| | ||| ||| Sbjct 1443067 GCCTTCTGATACTCCCCCACGCGCTTCTCAAAGAAATTGGTCTTCCCCTGCAACGAAATC 1443008 Query 793959 AACTCCATCCACGGGAACGGGTTGGCCGT-CAG-GTAGTGCTTCTCGCACCCGAGCGACG 794016 | ||||||||| || ||||| | | || ||| |||| |||| || |||| Sbjct 1443007 AGCTCCATCCAGTCAAAAGGGTT--CTGAACATTGTACACCTTCCCGCAGCCAAGCGCAA 1442950 Query 794017 CAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGA 794076 | | || || || || || || ||||||||||| | ||| | | | ||||| || | Sbjct 1442949 CCAACAAACGATCCGCCACAAACTCAATGTACTGACCCATCAACTCCCCATTCATCCCCA 1442890 Query 794077 TGAGCGC-CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATG 794135 | ||| ||| || |||| |||| |||||||| ||||||| || || || || | Sbjct 1442889 GCAACGCGCAC-GGAAGCGCGTCGCACACAAACTCCCTCTCGATATCCACAGCGTCCCTC 1442831 Query 794136 ATGATCT 794142 | ||||| Sbjct 1442830 ACGATCT 1442824 >seq9 Length=10489139 Score = 113 bits (124), Expect = 7e-19 Identities = 167/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 ||||||||||||||||| || || |||||||||||| |||| ||||||||| | | || Sbjct 3492883 TTGGTGACGGCCTTGGTGCCTTCAGAGACGGCGTGCTTGGCGAGTTCGCCGGGGAGGACA 3492942 Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGT--GTTGCGCTTGTTAGTGCGCG 1485592 ||||| || ||||| ||||||||||||| | || || ||| |||||| || | Sbjct 3492943 AGGCGAACAGCGGTTTGGATCTCGCGGGAGGTTATTGTAGGTT--TCTTGTTGTATCGAG 3493000 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 | || | | || ||| || | || ||||||| || |||||||| Sbjct 3493001 CGAGTCTTGAAGATTCTTGAGCGAGTTTCTCAAAGATATCGTTGATGAAGCTGTTCATGA 3493060 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 || ||| | ||| ||||||| || | ||| |||||||||||||| || ||||| Sbjct 3493061 TCCCCATGGCCTTGCTGGAGATCCCTATGTCAGGGTGCACCTGCTTTAGAACCTT 3493115 >seq3 Length=29476785 Score = 105 bits (116), Expect = 1e-16 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 |||||||| |||||||| || || || ||||||||| |||| || || ||| | | || | Sbjct 17719352 TTGGTGACAGCCTTGGTGCCTTCGGAAACGGCGTGCTTGGCGAGCTCTCCGGGGAGGACC 17719411 Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCC 1485594 | ||||| || || ||||||||||||| | ||| ||| |||||| | ||| Sbjct 17719412 AAACGCACCGCCGTTTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTACCTGGCC 17719471 Query 1485595 AGGCGGCCGGCCTCGGTGC-CGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAT 1485653 | ||| || ||| ||| ||| || | |||||||| | || ||||||||| Sbjct 17719472 AATCGGGAGGACTC-CTGCGCGAGTTTCTCAAAGATGTCGTTTATGAAGCTGTTCATGAT 17719530 Query 1485654 CGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| | ||| ||||||| || | |||||| ||||| ||||| | |||||| Sbjct 17719531 CCCCATGGCCTTGCTGGAGATCCCGATGTCGGGATGCACTTGCTTCAAAACCTTG 17719585 >seq4 Length=12502730 Score = 96.9 bits (106), Expect = 5e-14 Identities = 169/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||||||||||||||||||||| ||||||||||| |||||| ||| ||| ||| Sbjct 3173814 TGAACTTGGTGACGGCCTTGGTACCCTCGGAGACGGCGTGTTTGGCCAATTCTCCGGGCA 3173873 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC-GCTTGTTAGTG 1485588 | || | || || ||||||||||| | | ||| || | || |||||| | Sbjct 3173874 GCACAAGCCTGACCGCAGTCTGGATCTCCCTTGAAGTGATGGT-TGGCTTCTTGTTGTAG 3173932 Query 1485589 CGCGCCAGGCGGCCGGCCTCGGTGCCGATGC-GGTCGATCATGTCGTTGACAAACGAGTT 1485647 || || || | | || || | || |||| |||||||||| || ||| Sbjct 3173933 CGGGCAAGTCTAGAAGATTC-CTGAGCAAGCTTCTCGAAGATGTCGTTGATGAAGCTGTT 3173991 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||| | ||| | ||||| || | ||| ||||| |||||||| || ||||| Sbjct 3173992 CATGATTCCCATGGCCTTGCTTGAGATACCAATGTCTGGGTGAACCTGCTTCAGAACCTT 3174051 Query 1485708 G 1485708 | Sbjct 3174052 G 3174052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7912359899039304