Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq706 109 4e-19 seq11 109 4e-19 seq848 95.1 1e-14 >seq706 Length=122390 Score = 109 bits (120), Expect = 4e-19 Identities = 153/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 ||||||||||||||| || ||| | ||||| || ||||| ||| | || |||| ||| Sbjct 23018 AATGCAAATTTTTGTTAAGACTCTCACAGGAAAGACCATAACCCTTGAGGTGGAGAGCTC 22959 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 || || | | | | || ||| |||||| || ||||| ||| | || || | Sbjct 22958 T-GACACCATAGACAATGTTAAAGCCAAGATTCAAGACAAAGAGGGCATCCCACCAGACC 22900 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 | ||||| || |||| ||| || |||||||| ||||| | | ||| |||| || |||| Sbjct 22899 AACAGAGGCTCATTTTTGCTGGGAAACAGCTTGAGGATGGCCGAACCTTGGCTGATTACA 22840 Query 107734 ACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 |||||||||||||||| || | ||| ||||| Sbjct 22839 ACATTCAAAAGGAGTCCACCCTTCACTTGGTG 22808 >seq11 Length=48970052 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||||||||| || || ||||| || ||| | || |||| | Sbjct 43336735 ATGCAAATTTTCGTCAAAACTTTGACGGGAAAAACTATCACCTTGGAGGTGGAGAGTTCA 43336794 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | |||||| |||||| || || || || | || || ||| Sbjct 43336795 GATACCATTGATAATGTAAAAGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAG 43336854 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||| | ||| || |||||||| || || | | ||| | ||||| || ||| Sbjct 43336855 CAGAGACTTATCTTTGCTGGAAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAC 43336914 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 || || |||||||| || ||||| |||||||| Sbjct 43336915 ATCCAGAAGGAGTCCACCCTGCACTTGGTGTTG 43336947 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGG-AGGCTGG 107614 |||||||| ||||| |||||||||||||| || ||||||||| | || || | ||| Sbjct 43329858 ATGCAAATATTTGTGAAAACTTTAACAGGGAAGACCATTACCTTGGAGGTGGAAAGCT-C 43329916 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | || || ||||||| || || |||||| | ||| ||| || Sbjct 43329917 TGATACTATTGACAGTGTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCCCCGGACCA 43329976 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| ||||||| ||| || || || |||| || | || |||| || ||||| Sbjct 43329977 GCAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCTGATTACAA 43330036 Query 107735 CATTCAAAAGGAGTCTACGTTGCA 107758 ||||| || ||||| || || || Sbjct 43330037 TATTCAGAAAGAGTCCACCTTACA 43330060 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 |||||||| ||||| |||||| | ||||| || ||||||||| | || ||| ||| Sbjct 43337419 ATGCAAATATTTGTGAAAACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 43337478 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | | || ||| ||||||| || || || ||| | || ||||| Sbjct 43337479 -GATACTATTGACAATGTTAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATCA 43337537 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| ||||||| ||| || || || |||| || | || |||||||||| || Sbjct 43337538 GCAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCGGACTATAA 43337597 Query 107735 CATTCAAAAGGAGTCTACGTTGCA 107758 ||||| ||||| || || || || Sbjct 43337598 TATTCAGAAGGAATCCACTTTACA 43337621 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| |||||||| || || || ||||| ||| |||| ||| ||| Sbjct 43328946 ATGCAGATCTTTGTGAAAACTTTGACCGGTAAGACCATCACCCTCGAGGTGGAAAGCTCA 43329005 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | | || ||| ||||| ||||| || || | || |||||| Sbjct 43329006 -GACACCATAGACAATGTGAAAGCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGATCA 43329064 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||| || |||| ||| || || ||||| ||||||| | ||| | || || ||||| Sbjct 43329065 ACAGAGGCTGATTTTTGCTGGCAAGCAGCTCGAGGACGGGAGAACCCTCGCCGATTACAA 43329124 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 |||||| |||||||| || | || ||||| Sbjct 43329125 CATTCAGAAGGAGTCCACCCTCCATTTGGTG 43329155 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| |||||||| || || || ||||| ||| | || ||| ||| Sbjct 43336507 ATGCAGATCTTTGTGAAAACTTTGACCGGTAAGACCATCACCCTTGAGGTGGAAAGCTCA 43336566 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | | || ||| ||||| || ||||| || | || |||||| Sbjct 43336567 -GACACCATCGACAATGTGAAAGCCAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCA 43336625 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||| || |||| ||| || || ||||| ||||||| | ||| | || || ||||| Sbjct 43336626 ACAGAGGCTGATTTTTGCTGGCAAGCAGCTCGAGGACGGGAGAACCCTCGCCGATTACAA 43336685 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 |||||| |||||||| || | || ||||| Sbjct 43336686 CATTCAGAAGGAGTCCACCCTCCATTTGGTG 43336716 >seq848 Length=99386 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 ||||||||| ||||| || || |||| || || || || ||| | || |||| ||| Sbjct 56538 AATGCAAATATTTGTGAAGACCCTAACCGGAAAGACAATCACCCTTGAGGTGGAGAGCTC 56597 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 || || | | | | || || |||||| || ||||||||| | || || | Sbjct 56598 T-GACACCATTGACAACGTCAAGGCTAAGATTCAGGACAAAGAAGGCATCCCACCAGACC 56656 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 |||| || || |||| ||| || |||||||| ||||| | | ||| |||| ||||| | Sbjct 56657 AGCAAAGGCTCATTTTTGCTGGGAAACAGCTCGAGGATGGCCGAACTTTGGCAGACTATA 56716 Query 107734 ACATTCAAAAGGAGTCTACGTTGCACATGGT 107764 |||||||||||||||| || | ||| |||| Sbjct 56717 ACATTCAAAAGGAGTCCACTCTACACTTGGT 56747 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 |||||||| || || || ||| | || || || ||||| ||| | || |||| ||| Sbjct 63612 ATGCAAATCTTCGTTAAGACTCTCACCGGTAAGACCATCACCCTTGAGGTGGAGAGCTCT 63671 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | | || || |||||| || ||||||||| | || || || Sbjct 63672 -GACACCATTGACAATGTTAAGGCTAAGATTCAAGACAAAGAAGGCATCCCACCAGACCA 63730 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| || ||||||| ||| || |||||||| ||||| | || ||| | || || ||||| Sbjct 63731 GCAAAGGCTTATTTTTGCTGGGAAACAGCTCGAGGATGGCAGAACCCTAGCTGATTACAA 63790 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||| ||||||||||| || | ||| |||| Sbjct 63791 CATCCAAAAGGAGTCCACCCTTCACTTGGT 63820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398699187141304