Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq11 100 4e-16 seq848 91.5 2e-13 >seq11 Length=48970052 Score = 100 bits (110), Expect = 4e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | ||||| | ||||| || || ||||| | || || ||| | Sbjct 43337420 TGCAAATATTTGTGAAAACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCTG 43337479 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| ||| || || || || || ||||||||||| ||||| | Sbjct 43337480 ATACTATTGACAATGTTAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATCAGC 43337539 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || || ||||| || ||| | | || || | || ||||||| Sbjct 43337540 AGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCGGACTATAATA 43337599 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | || || ||||| ||| | ||| Sbjct 43337600 TTCAGAAGGAATCCACTTTACAT 43337622 Score = 93.3 bits (102), Expect = 7e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | ||||| |||||||| || || ||||| | || || ||| | Sbjct 43329859 TGCAAATATTTGTGAAAACTTTAACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCTG 43329918 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | | ||| || || || || || ||||||||||| || || || | Sbjct 43329919 ATACTATTGACAGTGTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCCCCGGACCAGC 43329978 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || || ||||| || ||| | | || || | ||||| |||| Sbjct 43329979 AGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCTGATTACAATA 43330038 Query 146212 TACAAAAAGAATCGAC 146227 | || ||||| || || Sbjct 43330039 TTCAGAAAGAGTCCAC 43330054 >seq848 Length=99386 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | || || |||| ||||| ||||| || |||| || || | Sbjct 56540 TGCAAATATTTGTGAAGACCCTAACCGGAAAGACAATCACCCTTGAGGTGGAGAGCTCTG 56599 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | || || || ||| || || ||||||||||| ||||| || || | Sbjct 56600 ACACCATTGACAACGTCAAGGCTAAGATTCAGGACAAAGAAGGCATCCCACCAGACCAGC 56659 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| ||||||||||| || ||||| | || ||| |||| || |||| ||||| | Sbjct 56660 AAAGGCTCATTTTTGCTGGGAAACAGCTCGAGGATGGCCGAACTTTGGCAGACTATAACA 56719 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||| || || ||| | || || || Sbjct 56720 TTCAAAAGGAGTCCACTCTACACTTGGT 56747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785807357805120