Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq9542 86.0 7e-12 seq9786 84.2 2e-11 >seq9542 Length=931 Score = 86.0 bits (94), Expect = 7e-12 Identities = 78/94 (83%), Gaps = 6/94 (6%) Strand=Plus/Plus Query 76069 TGGAGGAAGCGGTGGGATTCGAACCCACGGACCGTATCACTACGGCCTC--CGGTTTTCA 76126 ||| |||||||||| ||||||||| |||||| | |||| || |||| ||||||||| Sbjct 5 TGGCGGAAGCGGTGAGATTCGAACTCACGGAG-GACTCAC-AC--CCTCGTCGGTTTTCA 60 Query 76127 AGACCGGTGTAATAAGCCGCTCTACCACGCTTCC 76160 ||||||||| | ||| ||||||| |||||||||| Sbjct 61 AGACCGGTGCATTAAACCGCTCTGCCACGCTTCC 94 >seq9786 Length=898 Score = 84.2 bits (92), Expect = 2e-11 Identities = 77/95 (81%), Gaps = 7/95 (7%) Strand=Plus/Plus Query 76069 TGGAGGAAGCGGTGGGATTCGAACCCACGGACCG-TATCACTACGGCCTC--CGGTTTTC 76125 ||| |||||||||| ||||||||| |||||| | ||| | | |||| |||||||| Sbjct 185 TGGCGGAAGCGGTGAGATTCGAACTCACGGAGGGGTATAA----GCCCTCGTCGGTTTTC 240 Query 76126 AAGACCGGTGTAATAAGCCGCTCTACCACGCTTCC 76160 |||||||||| | ||| ||||||| |||||||||| Sbjct 241 AAGACCGGTGCATTAAACCGCTCTGCCACGCTTCC 275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554102025980160