Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq12907 161 9e-35 >seq12907 Length=631 Score = 161 bits (178), Expect = 9e-35 Identities = 212/291 (73%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 26495 CCAATAAAGTTCTCACCAATAATAAACGCTTCTGCTAAACCTTTTGGGCTATCCTGTATT 26554 |||||||| | |||||||||||||| |||| ||||||||| | ||| || ||| || Sbjct 534 CCAATAAACTCTTCACCAATAATAAATGCTTGTGCTAAACCATCTGGACTTGGCTGAATG 475 Query 26555 GCATACTGTAGGGAAATACCAAAAGAAGAACCATCACCTAG-AAGATTTACAAAATTAAT 26613 ||||||| || |||||| || || |||| ||||| ||| || |||| || Sbjct 474 GCATACTCTAATCGAATACCGAACTGAGCCCCATTGCCTAGTAAGCGTTT-AAAACTATC 416 Query 26614 TTGATCTTCTGGTGTTGTAATTATTAGTATTTCCCTAATTCCAGAAAGCATTAGGACAGA 26673 | ||||| || |||||||| || || | ||| |||||| | | ||| || || || Sbjct 415 TAAGTCTTCAGGAGTTGTAATGATCAGAACATCCTGAATTCCTGCCAACATCAGTACTGA 356 Query 26674 GAGTGGATAATAAATCATAGGTTTATCGTAAATTGGTAATAGTTGTTTACTAACCCCTTT 26733 | ||||||||||||||| |||||||||||||| || | ||| ||||| || |||| Sbjct 355 CAATGGATAATAAATCATTGGTTTATCGTAAATAGGCAGTAGCTGTTTCGATACACCTTG 296 Query 26734 AGTAACTGGGTAAAGCCTTGTTCCACTACCACCTGCTAAGATAATACCTTT 26784 |||| || || || | ||| ||| ||||||||||| ||||| ||||| Sbjct 295 GGTAATCGGATACAGTCGTGTACCAGAGCCACCTGCTAAAATAATGCCTTT 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475213270936320