Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq10427 217 5e-51 >seq10427 Length=835 Score = 217 bits (240), Expect = 5e-51 Identities = 310/431 (72%), Gaps = 9/431 (2%) Strand=Plus/Minus Query 188769 TCTT-TTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATA 188827 |||| ||||| || || || ||||| |||||||| || |||| ||||| |||| | Sbjct 567 TCTTATTAGTAGGACCAACGGGTTCGGGTAAAACCTTGCTTGCGCAAACGATGGCCCGTC 508 Query 188828 TGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAG 188887 | | |||| ||| | ||||| ||||||| || | | || ||||| || ||||| | Sbjct 507 TTCTCGATGTTCCTTTTGCTATGGCTGATGCCACGACACTTACCGAAGCAGGCTATGTCG 448 Query 188888 GTGAAGATGTGGAAAACGTATTGCTTC----GTTTAATCCAAGCAGCTGATTACGATATC 188943 |||||||||| |||||| |||| | | | || | ||| ||| || || ||| | Sbjct 447 GTGAAGATGTTGAAAAC--ATTG-TACAAAAGCTTC-TACAAAAAGCAGACTATGATGTA 392 Query 188944 GAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCA 189003 ||| |||| || || ||| | |||||||| ||| | || || ||| | | || || Sbjct 391 GAAAAAGCGCAAAAAGGTATTATCTATATCGACGAAATCGACAAGATTACCCGTAAGTCT 332 Query 189004 GAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAA 189063 |||| | |||| || || || ||||| || || ||||| ||||||||||| ||| | ||| Sbjct 331 GAAAACCCATCGATCACGCGTGATGTGTCGGGTGAAGGTGTACAGCAAGCGTTACTGAAA 272 Query 189064 ATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAA 189123 || || |||||||| ||||| |||| ||||||||||||||||| || || || ||| Sbjct 271 ATGATCGAAGGTACGGTTGCCTCTATTCCACCTCAAGGTGGTCGTAAGCATCCGCAGCAA 212 Query 189124 GAAATGCTTGAAATAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGT 189183 ||| | || |||| ||||| | ||||||||||| || |||||| || || ||| Sbjct 211 GAATTCATTCAAATTGATACTTCAAATATCTTGTTCATCTGTGGTGGGGCATTCTCAGGT 152 Query 189184 CTTGAAAACAT 189194 ||||| || || Sbjct 151 CTTGAGAAAAT 141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591165198883328