Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29]
36,536 sequences; 592,970,700 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq11 178 3e-39
seq848 174 3e-38
seq706 161 2e-34
seq6 107 4e-18
seq2 107 4e-18
>seq11
Length=48970052
Score = 178 bits (196), Expect = 3e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657
|| ||| || |||||||| || |||||||| || || ||||| | || |||| || ||
Sbjct 43329614 CAAAACCAAATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCGCAAGGGTTCTTCCATC 43329555
Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717
||| |||||||| ||||||||||| || || || || ||||| || || || ||||| ||
Sbjct 43329554 TTCGAGTTGTTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 43329495
Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777
|||||||| ||||| || || ||||| ||||| | ||| || ||||||||||| ||
Sbjct 43329494 CTGAATCTTGGCTTTCACGTTATCAATGGTATCTGAACTTTCAACCTCCAAAGTTATGGT 43329435
Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || ||||| ||||| ||||| ||||||||
Sbjct 43329434 CTTTCCCGTCAAAGTCTTCACAAAAATCTGCAT 43329402
Score = 176 bits (194), Expect = 9e-39
Identities = 168/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|||| || || || ||||| ||||| ||||| ||||| ||||||| || | | ||
Sbjct 43337405 CGCAACACCAAATGTAGAGTGGATTCCTTCTGGATATTGTAATCAGCAAGGGTACGCCCA 43337346
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || || || ||||||||||| || || || || ||||| || || || ||||||
Sbjct 43337345 TCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGAATGCCCTCCTTA 43337286
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| |||||||| || || ||||| ||||| |||||| | ||| || |||||||||||
Sbjct 43337285 TCCTGAATCTTAGCCTTCACATTGTCAATAGTATCAGAACTTTCAACCTCCAAAGTTATG 43337226
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| |||||||| ||||| ||||| ||||||||
Sbjct 43337225 GTCTTCCCTGTCAAAGTCTTCACAAAAATCTGCAT 43337191
Score = 158 bits (174), Expect = 2e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|||| || |||||||| || || || ||||| || |||||||| | || |||| ||
Sbjct 43336949 CGCAACACCAAGTGCAGGGTGGACTCCTTCTGGATGTTATAATCCGCAAGGGTTCTTCCA 43336890
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || ||||||||||||||||| ||||| || || ||||| || || || |||||
Sbjct 43336889 TCTTCAAGCTGTTTTCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCCTCCTTG 43336830
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| |||||||| ||||||||||| ||||| ||||| | || || ||||| || ||
Sbjct 43336829 TCCTGAATCTTGGCTTTTACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTGATA 43336770
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || || ||||| || || || || || |||||
Sbjct 43336769 GTTTTTCCCGTCAAAGTTTTGACGAAAATTTGCAT 43336735
Score = 154 bits (170), Expect = 3e-32
Identities = 163/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|||| ||| ||||| || || || || ||||| || || ||||| | || |||| ||
Sbjct 43329388 CGCAAAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTTCTTCCA 43329329
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || ||||| ||||||||||| || || || || ||||| || || || |||||
Sbjct 43329328 TCTTCCAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTG 43329269
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| |||||||| ||||| ||||| ||||||||||| | ||| || ||||| || ||
Sbjct 43329268 TCCTGAATCTTGGCTTTCACATTATCAATCGTATCTGAACTTTCAACCTCCAAGGTGATA 43329209
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || ||||| || || || || || |||||
Sbjct 43329208 GTCTTTCCCGTCAAAGTTTTGACGAAAATTTGCAT 43329174
Score = 154 bits (170), Expect = 3e-32
Identities = 163/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|||| || || || ||||| ||||| ||||| ||||| || |||| || | | ||
Sbjct 43329844 CGCAACACCAAATGTAGAGTGGATTCCTTCTGGATATTGTAGTCAGCAAGGGTACGCCCA 43329785
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || || || ||||||||||| || || || ||||| || || || |||||||||
Sbjct 43329784 TCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTCTGCTGATCCGGTGGAATACCTTCCTTA 43329725
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| |||||||| || || ||||| || || || ||| | ||| || |||||||| ||
Sbjct 43329724 TCCTGAATCTTAGCCTTCACATTATCTATAGTGTCAGAACTTTCAACCTCCAAAGTAATG 43329665
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || |||| ||||| |||||||| |||||
Sbjct 43329664 GTCTTTCCCGTCAGAGTCTTCACAAATATTTGCAT 43329630
Score = 154 bits (170), Expect = 3e-32
Identities = 163/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|||| || || |||||||| || || ||||| || || ||||| | || | | ||
Sbjct 43337177 CGCAACACCAAATGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTACGCCCA 43337118
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || ||||| || |||||||| || || || || ||||| || || || |||||
Sbjct 43337117 TCCTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGCGGGATACCCTCCTTG 43337058
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||||||||| | ||| ||||| ||||| ||||| | ||| || |||||||||||
Sbjct 43337057 TCTTGAATCTTGGTTTTCACATTATCAATAGTATCTGAACTTTCAACCTCCAAAGTTATG 43336998
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || ||||| ||||| ||||| ||||||||
Sbjct 43336997 GTCTTTCCAGTCAAGGTCTTCACAAAAATCTGCAT 43336963
Score = 145 bits (160), Expect = 1e-29
Identities = 151/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 82613 AGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCC 82672
||| ||||| ||||| |||||||| || | | | | ||| ||||| | ||| || ||
Sbjct 43337616 AGTGGATTCCTTCTGAATATTATAGTCCGCCAAGGTACGACCATCTTCCAATTGCTTCCC 43337557
Query 82673 AGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTT 82732
|||||| || || || || |||||||| || || || ||||| || ||||||||||||||
Sbjct 43337556 AGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTTGCTTT 43337497
Query 82733 TACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGT 82792
||||| ||||| |||||| ||| || ||||| || || ||||| ||||||| ||
Sbjct 43337496 AACATTGTCAATAGTATCAGAGCTTTCCACCTCCAAGGTAATGGTCTTCCCTGTCAGAGT 43337437
Query 82793 CTTTACAAATATCTGCAT 82810
|| |||||||| |||||
Sbjct 43337436 TTTCACAAATATTTGCAT 43337419
Score = 138 bits (152), Expect = 2e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| ||||| | || | || || |||||||| ||||| ||||||| | | | |||
Sbjct 43330073 ACGAAGAACAAGATGTAAGGTGGACTCTTTCTGAATATTGTAATCAGCCAAGGTACGACC 43330014
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| | ||| || |||||||| || || || || || || || || || ||||||||
Sbjct 43330013 ATCTTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTT 43329954
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| ||||||||||| || ||| | ||||| |||||| ||| || ||||| || ||
Sbjct 43329953 GTCCTGAATCTTTGCCTTCACACTGTCAATAGTATCAGAGCTTTCCACCTCCAAGGTAAT 43329894
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| ||||| || || || |||||||| |||||
Sbjct 43329893 GGTCTTCCCTGTTAAAGTTTTCACAAATATTTGCAT 43329858
>seq848
Length=99386
Score = 174 bits (192), Expect = 3e-38
Identities = 168/216 (78%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||||| ||| | ||| |||||||| |||||||| || || ||||||| ||| | || ||
Sbjct 57666 ACGCAAAACAAGGTGAAGAGTAGACTCTTTCTGAATGTTGTAATCAGCAAGAGTCCTTCC 57607
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| |||| ||| || ||||||||||| | || || || ||||| || ||||| |||||
Sbjct 57606 ATCCTCTAATTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTT 57547
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||| || || ||||| ||||| |||||||| || | ||| || ||||| || ||
Sbjct 57546 GTCTTGGATTTTGGCTTTGACATTATCAATCGTGTCTGAACTTTCAACCTCCAAGGTAAT 57487
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || ||||| ||||| ||||||||||||||
Sbjct 57486 AGTCTTTCCAGTCAAAGTCTTGACAAATATCTGCAT 57451
Score = 168 bits (186), Expect = 1e-36
Identities = 167/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||||| || | ||| |||||||| |||||||| || || ||||||| ||| | || ||
Sbjct 64283 ACGCAAGACAAGGTGAAGAGTAGACTCTTTCTGAATGTTGTAATCAGCAAGAGTCCTTCC 64224
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || | ||| || ||||||||||| | |||||||| ||||| || ||||| |||||
Sbjct 64223 ATCCTCCAATTGCTTCCCAGCAAAGATCAACCTTTGTTGGTCTGGTGGAATTCCCTCCTT 64164
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||| || |||||||| ||||| ||||| || || | ||| || ||||| || ||
Sbjct 64163 GTCTTGGATTTTTGCTTTGACATTGTCAATAGTGTCTGAACTTTCAACCTCCAAGGTAAT 64104
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || ||||| ||||| ||||| ||||||||
Sbjct 64103 AGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 64068
Score = 132 bits (146), Expect = 9e-26
Identities = 169/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
||||||| |||| || || || | ||| || ||||| || ||||| ||||| || || |
Sbjct 56995 TACCTCCCCTCAGGCGAAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCTG 56936
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
|| | | || ||||| || |||||||||||||| || | |||||||| ||||| |
Sbjct 56935 CCAGTGTCCGTCCATCTTCGAGCTGTTTTCCAGCAAAAATCAACCTTTGTTGGTCTGGGG 56876
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760
| || || ||||| || || ||||| || |||||||| || || || ||| || | ||
Sbjct 56875 GAATACCCTCCTTGTCCTGGATCTTAGCCTTTACATTGTCTATAGTGTCA-GAGCTCTCA 56817
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | || || ||||| || || | ||||| ||||| ||||||||
Sbjct 56816 ACCTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTAACAAAAATCTGCAT 56767
Score = 132 bits (146), Expect = 9e-26
Identities = 161/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| ||||| ||||| || || || || || || || || ||||||| ||| |||| ||
Sbjct 63827 ACGGAGAACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCTAGGGTTCTGCC 63768
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || ||||| |||||||| || || ||||| || ||||| || || ||||| ||
Sbjct 63767 ATCCTCGAGCTGTTTCCCAGCAAAAATAAGCCTTTGCTGGTCTGGTGGGATGCCTTCTTT 63708
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773
||||||||||| || || ||||| ||||| || ||| || | || || || | || |
Sbjct 63707 GTCTTGAATCTTAGCCTTAACATTGTCAATGGTGTCA-GAGCTCTCCACCTCAAGGGTGA 63649
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| ||||| || || | ||||| || || || |||||
Sbjct 63648 TGGTCTTACCGGTGAGAGTCTTAACGAAGATTTGCAT 63612
Score = 127 bits (140), Expect = 4e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|||| || | ||| || || ||||||||||| || || || |||| ||| | || ||
Sbjct 57209 CGCAAGACAAGGTGGAGTGTTGATTCTTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCA 57150
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || | ||| || |||||||| || | || || || ||||| || || || |||||
Sbjct 57149 TCCTCCAATTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTG 57090
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| ||||| |||| || ||||| || || || || | ||| || |||| || ||
Sbjct 57089 TCCTGAATTTTTGTCTTCACATTATCGATGGTGTCTGAACTTTCAACCTCCAGGGTAATA 57030
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || ||||| ||||||||||| ||||||||
Sbjct 57029 GTCTTTCCAGTCAAAGTCTTTACAAAGATCTGCAT 56995
Score = 122 bits (134), Expect = 2e-22
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||||||| || || | ||| || || || || ||||| || || || || |
Sbjct 64066 CCACCCCTCAAACGAAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCTGCA 64007
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || || || || ||||| |||||||| || || || ||||| ||||| ||
Sbjct 64006 AGTGTGCGTCCATCCTCAAGCTGTTTCCCAGCAAAAATGAGCCTCTGTTGGTCTGGTGGG 63947
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762
|| || || || ||||||||||| || || ||||| || || || || | || | || ||
Sbjct 63946 ATACCCTCTTTGTCTTGAATCTTAGCCTTGACATTATCTATGGTGTC-TGAGCTCTCAAC 63888
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||| | || || ||||| || || | ||||| |||||||| ||||||
Sbjct 63887 TTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTAACAAATATTTGCATT 63839
Score = 105 bits (116), Expect = 1e-17
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| || || || || || || || || ||||| | || | | ||
Sbjct 56526 ACGGAGCACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAATCGGCGAGGGTACGGCC 56467
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || || ||||||||||| || | ||| || || || || || ||||||||
Sbjct 56466 ATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCGGGTGGGATGCCTTCCTT 56407
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|||||||| || || || ||||| || || ||||| | |||||||| | ||| ||
Sbjct 56406 GTCTTGAATTTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCTACTTCGAGAGTGAT 56347
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || || || | ||||| || || || |||||
Sbjct 56346 GGTTTTACCGGTGAGGGTCTTAACGAAGATTTGCAT 56311
>seq706
Length=122390
Score = 161 bits (178), Expect = 2e-34
Identities = 166/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||||| || | ||| |||||||| |||||||| || ||||| |||| ||| | || ||
Sbjct 22346 ACGCAACACAAGGTGAAGAGTAGACTCTTTCTGAATGTTATAGTCAGCAAGAGTCCTTCC 22405
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| | ||| || ||||||||||| | || || || ||||| || ||||| |||||
Sbjct 22406 ATCTTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTT 22465
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| ||||| || || || ||||| ||||| ||||| | || || ||||| || ||
Sbjct 22466 GTCCTGAATTTTAGCCTTGACATTATCAATTGTATCTGAACTCTCAACCTCCAAGGTAAT 22525
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||| |||||||| ||||| ||||| |||||||||
Sbjct 22526 TGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCATT 22562
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| |||| ||| || || ||||| || ||||| || ||||| ||||| || || | |
Sbjct 22563 CCTCCCCTCAGACGAAGGACCAAGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCTGCT 22622
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| |||| || ||||| || || |||||||||||||| | ||||| || ||||| ||
Sbjct 22623 AGAGTTCTTCCATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCTGGTGGG 22682
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
||||| ||||| || || ||||| || || ||||| || || || || | || ||
Sbjct 22683 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTATCGATTGTGTCTGAACTCTCAACC 22742
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| ||||| | ||||| || || ||||||||
Sbjct 22743 TCAAGGGTGATGGTCTTTCCTGTTAGGGTCTTAACGAAAATCTGCAT 22789
Score = 125 bits (138), Expect = 1e-23
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || ||||| || || || || || || || || |||||||
Sbjct 22789 TACCACCGCGAAGACGGAGCACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAATCAG 22848
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| || || || || ||||| |||||||| || || || ||||| ||||| |
Sbjct 22849 CCAAGGTTCGGCCATCCTCAAGCTGTTTCCCAGCAAAAATGAGCCTCTGTTGGTCTGGTG 22908
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760
| || || || || ||||||||||| ||||| ||||| || || || ||| || | ||
Sbjct 22909 GGATGCCCTCTTTGTCTTGAATCTTGGCTTTAACATTGTCTATGGTGTCA-GAGCTCTCC 22967
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|| || | ||||| ||||| ||||| | ||||| ||||| || ||||||
Sbjct 22968 ACCTCAAGGGTTATGGTCTTTCCTGTGAGAGTCTTAACAAAAATTTGCATT 23018
Score = 123 bits (136), Expect = 5e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| ||||| ||||| || || || || ||||| | || ||| ||
Sbjct 23030 ACGGAGCACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAATCGGCAAGGGTTCGCCC 23089
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || || |||||||| || || | || || ||||| || || ||||||||
Sbjct 23090 ATCCTCAAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCTGGTGGGATCCCTTCCTT 23149
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||||| || || || || || || ||||| | || ||||| | ||| ||
Sbjct 23150 GTCTTGAATCTTGGCCTTCACGTTATCTATGGTATCGGAACTCTCCACTTCGAGAGTGAT 23209
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || |||| ||||| ||||| || |||||
Sbjct 23210 GGTCTTACCAGTCAGGGTCTTAACAAAGATTTGCAT 23245
>seq6
Length=23791330
Score = 107 bits (118), Expect = 4e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || || | ||||||||| | ||| || || || || ||||| || || || ||||
Sbjct 23717536 CCACCCCTGAGACGCAGAACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCG 23717595
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || || || || |||||||||||||| || | ||||| || ||||| ||
Sbjct 23717596 AGGGTGCGTCCATCCTCAAGCTGTTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGG 23717655
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || |||||||| | ||||| || || || || || ||| ||
Sbjct 23717656 ATCCCCTCCTTGTCCTGAATCTTGGACTTTACGTTGTCGATGGTGTCGGAGCTTTCCACC 23717715
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| || || | || || || |||||||||||
Sbjct 23717716 TCAAGGGTGATGGTCTTTCCGGTGAGGGTTTTGACGAATATCTGCAT 23717762
>seq2
Length=36921656
Score = 107 bits (118), Expect = 4e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||||| || ||||| ||||| || || ||||| || ||||| ||||
Sbjct 32545208 TACCACCACGAAGACGCAACACCAAGTGAAGAGTTGACTCCTTCTGGATGTTATAGTCAG 32545267
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
|| | | ||||| || || || || || || ||||| | || || || ||||| |
Sbjct 32545268 CGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGG 32545327
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| ||||||||||| || || ||||| | ||| || || || || || || ||| |
Sbjct 32545328 GGATTCCTTCCTTGTCCTGGATCTTAGTTTTCACGTTGTCGATGGTGTCGGAGCTTTCGA 32545387
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || || |||||||| || | ||||| || || ||||||||
Sbjct 32545388 CCTCGAGGGTGATTGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 32545436
Score = 105 bits (116), Expect = 1e-17
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || || ||||| ||||| || || || |||| || | | ||
Sbjct 32545449 ACGGAGGACGAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGTCC 32545508
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||| || || || ||||| || ||||| || | ||| || || || || |||||||||||
Sbjct 32545509 GTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGGGGAATTCCTTCCTT 32545568
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| || ||||| || || || || ||||| || ||| ||| || || | || ||
Sbjct 32545569 GTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCCACCTCGAGGGTGAT 32545628
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| || || || |||||
Sbjct 32545629 GGTCTTGCCGGTGAGGGTCTTAACGAAGATTTGCAT 32545664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981367589505704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |