Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_025434.1 Length=62699 Score E Sequences producing significant alignments: (Bits) Value seq6728 118 4e-22 >seq6728 Length=1825 Score = 118 bits (130), Expect = 4e-22 Identities = 264/394 (67%), Gaps = 11/394 (3%) Strand=Plus/Minus Query 10267 ATGCGTAATTACGCAACAATTTCACCTCAGTTCTGGTTAGGCGATACAGGGCGAAAACTA 10326 |||||| |||| |||| | |||||||||| || ||| |||| | ||||| | ||| Sbjct 1724 ATGCGTGATTATGCAAAAGTTTCACCTCATTTTTGGGTAGGTAAAACAGGAAAGCAGCTA 1665 Query 10327 AGGAAGTCTGGTCCGGAATGTATGGTAGTGGCGT---TGTATATGATGACCTCGCCTCAT 10383 | ||| | || ||| | || || ||| | | || | || || |||||| Sbjct 1664 AAAAAGAAT---CCTGAA-GCAT--TAATGGTTTCTCTTTACTTAATTACGAACCCTCAT 1611 Query 10384 TCCAATATGCTGGGCCTTTATTACCTGCCTGTTTTGTACATTGCTCACGAAACCGGACTT 10443 |||||||| |||| || || ||| |||| | |||||||||| || ||||| |||||| Sbjct 1610 GCCAATATGTTGGGTCTGTACTACATGCCAACTATGTACATTGCCCATGAAACTGGACTT 1551 Query 10444 GATCCT-GAAGGGGCTTCTANNNNNNNNNNNNTGGCTTGCGAGGCTGGTTTTTGCAGCTA 10502 | | | ||||| |||| | || || || || || ||||| || Sbjct 1550 -ACCTTAGAAGGAGCTTTGAAGGGGCTACAAAGTGCCTGTGAAGCAGGGTTTTGTGCTTA 1492 Query 10503 TGACCATGATTCTGAGGTTGTATGGGTGCATGAAATGGCAGCATGGCAGGTTGGTGAAGC 10562 || || || || |||||||| |||||| ||||||||||| | || || | ||| | Sbjct 1491 CGATCAAGACTCAGAGGTTGTTTGGGTGTATGAAATGGCACGCTTTCAAGTGGCTGAGGA 1432 Query 10563 GCTGAAACCAGGCGATAACCGTTGTGCTGGGGTAAGAAATGAATATTCCGCGTTGCTGGA 10622 ||| || |||| |||||||| || || || ||| || ||| | | | | || Sbjct 1431 GCTAAAGCCAGCAGATAACCGCTGCAAGGGTGTTCAAAAGGACTATGACTCACTACCTGA 1372 Query 10623 AAATCCTTTTTTATCATCATTTTATGATAGATAT 10656 ||||||||||||||| ||||||| |||| |||| Sbjct 1371 TAATCCTTTTTTATCAGCATTTTACGATAAATAT 1338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200422715515360