Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq9542 109 1e-18 seq9786 93.3 9e-14 >seq9542 Length=931 Score = 109 bits (120), Expect = 1e-18 Identities = 75/85 (88%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 73497 GTGGCAGAGTGGTTTAATGCAACGGTCTTGAAAACCGTCGAGGGTGAAAGTCCTCCGTGA 73556 ||||||||| ||||||||||| ||||||||||||||| |||||||| |||||||||||| Sbjct 88 GTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTGAGTCCTCCGTGA 29 Query 73557 GTTCAAATCTCACCTTCACCGCCAA 73581 |||| ||||||||| ||||||| Sbjct 28 GTTCGAATCTCACCGCTTCCGCCAA 4 >seq9786 Length=898 Score = 93.3 bits (102), Expect = 9e-14 Identities = 73/86 (85%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 73497 GTGGCAGAGTGGTTTAATGCAACGGTCTTGAAAACCGTCGAGGG-TGAAAGTCCTCCGTG 73555 ||||||||| ||||||||||| ||||||||||||||| |||||| | | | |||||||| Sbjct 269 GTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGCTTATACCCCTCCGTG 210 Query 73556 AGTTCAAATCTCACCTTCACCGCCAA 73581 ||||| ||||||||| ||||||| Sbjct 209 AGTTCGAATCTCACCGCTTCCGCCAA 184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1114649168845784