Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq10382 104 1e-17 >seq10382 Length=839 Score = 104 bits (114), Expect = 1e-17 Identities = 168/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 19959 TTGTATCAGGTTGGAATCCTCATGATGTTGCAGATGTAGATTTACCACCTTGCCATACAC 20018 ||||||| ||||||||||| || || | || | || | | | || || ||||| || | Sbjct 1 TTGTATCGGGTTGGAATCCACAAGAAGCTGGGCAAGTTGCTCTTCCTCCGTGCCACACTC 60 Query 20019 TATTTCAATTCTTTGTGAAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAAGTGCTG 20078 |||| || |||||||| | | || ||| | ||||| ||| | ||||| || ||||| | Sbjct 61 TATTCCAGTTCTTTGTCCATAACGGCAAACTGTCTTGTCAGCTCTATCAGCGCAGTGCCG 120 Query 20079 ACTTATTACTTGGTGTTCCATTTAATATTGCATCTTATGCTTTACTTACACACTTAGTTG 20138 | |||| | ||||| || ||||||||||| |||||| |||| || || | | | Sbjct 121 ATGTATTTTTAGGTGTGCCTTTTAATATTGCCAGTTATGCGCTACTCACCCATATGATCG 180 Query 20139 CATTAGAATGTGGGCTTAATGTTGGTGAGTTTGTTTGGGTTGGTGGTGATTGCCACATTT 20198 || || || || | ||| || || ||||| ||| ||||| ||| ||||||| Sbjct 181 CACAAGTCTGCGGTTTAGGTGTGGGGGACTTTGTCTGGACGGGTGGCGAT--ACACATTT 238 Query 20199 A 20199 | Sbjct 239 A 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318869149895336